RNA–Protein interactions for RNA: ENST00000588040.1

AC093227.1-201, humanhuman

TSL 3 BASIC

Gene AC093227.1, Length 1,360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC093227.1-201ENST00000588040 AEBP2Q6ZN18 517 aaPredicted RBP35.23■■■■□ 3.23
AC093227.1-201ENST00000588040 CHIC1Q5VXU3 224 aa32.86■■■□□ 2.85
AC093227.1-201ENST00000588040 SENP3Q9H4L4 574 aaPredicted RBP30.25■■■□□ 2.43
AC093227.1-201ENST00000588040 PHF23Q9BUL5 403 aaPredicted RBP29.66■■■□□ 2.34
AC093227.1-201ENST00000588040 POTEDQ86YR6 584 aa28.66■■■□□ 2.18
AC093227.1-201ENST00000588040 FOXD1Q16676 465 aa28.36■■■□□ 2.13
AC093227.1-201ENST00000588040 MSH5O43196 834 aa27.04■■□□□ 1.92
AC093227.1-201ENST00000588040 PIAS4Q8N2W9 510 aaPredicted RBP26.14■■□□□ 1.78
AC093227.1-201ENST00000588040 PPP6R1Q9UPN7 881 aa25.51■■□□□ 1.67
AC093227.1-201ENST00000588040 PLPPR3Q6T4P5 718 aa25.4■■□□□ 1.66
AC093227.1-201ENST00000588040 ADRA2BP18089 450 aa25.33■■□□□ 1.65
AC093227.1-201ENST00000588040 CACNB1Q02641 598 aaPredicted RBP24■■□□□ 1.43
AC093227.1-201ENST00000588040 DMRT2Q9Y5R5 561 aa23.79■■□□□ 1.4
AC093227.1-201ENST00000588040 MAPK8IP2Q13387 824 aaPredicted RBP23.67■■□□□ 1.38
AC093227.1-201ENST00000588040 SCAF1Q9H7N4 1312 aaKnown RBP23.15■■□□□ 1.3
AC093227.1-201ENST00000588040 RNF39Q9H2S5 420 aa22.97■■□□□ 1.27
AC093227.1-201ENST00000588040 DCAF8L1A6NGE4 600 aa22.81■■□□□ 1.24
AC093227.1-201ENST00000588040 C1QBPQ07021 282 aaKnown RBP22.56■■□□□ 1.2
AC093227.1-201ENST00000588040 HOXD11P31277 338 aaPredicted RBP22.4■■□□□ 1.18
AC093227.1-201ENST00000588040 PPP4R3CPQ6ZMV5 832 aa22.35■■□□□ 1.17
AC093227.1-201ENST00000588040 POTEHQ6S545 545 aa22.19■■□□□ 1.14
AC093227.1-201ENST00000588040 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
AC093227.1-201ENST00000588040 RNF216Q9NWF9 866 aaPredicted RBP21.86■■□□□ 1.09
AC093227.1-201ENST00000588040 NCBP3Q53F19 620 aaKnown RBP21.79■■□□□ 1.08
AC093227.1-201ENST00000588040 CNKSR2Q8WXI2 1034 aa21.76■■□□□ 1.07
AC093227.1-201ENST00000588040 KCNA4P22459 653 aa21.74■■□□□ 1.07
AC093227.1-201ENST00000588040 NPM3O75607 178 aaKnown RBP21.42■■□□□ 1.02
AC093227.1-201ENST00000588040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.3■■□□□ 1
AC093227.1-201ENST00000588040 DSG3P32926 999 aa21.06■□□□□ 0.96
AC093227.1-201ENST00000588040 CAPN15O75808 1086 aa20.82■□□□□ 0.92
AC093227.1-201ENST00000588040 SPINK5Q9NQ38 1064 aaPredicted RBP20.82■□□□□ 0.92
AC093227.1-201ENST00000588040 SLC4A1APQ9BWU0 796 aaKnown RBP20.72■□□□□ 0.91
AC093227.1-201ENST00000588040 U3KPZ7 1027 aaPredicted RBP20.72■□□□□ 0.91
AC093227.1-201ENST00000588040 SLC4A2P04920 1241 aa20.23■□□□□ 0.83
AC093227.1-201ENST00000588040 ABCB7O75027 752 aa20.21■□□□□ 0.83
AC093227.1-201ENST00000588040 CHRDL2Q6WN34 429 aa20.21■□□□□ 0.83
AC093227.1-201ENST00000588040 SP7Q8TDD2 431 aaPredicted RBP20.17■□□□□ 0.82
AC093227.1-201ENST00000588040 TRHP20396 242 aaPredicted RBP20.16■□□□□ 0.82
AC093227.1-201ENST00000588040 RBM42Q9BTD8 480 aaKnown RBP20.1■□□□□ 0.81
AC093227.1-201ENST00000588040 ZNF219Q9P2Y4 722 aaPredicted RBP20.08■□□□□ 0.81
AC093227.1-201ENST00000588040 FOXD4L1Q9NU39 408 aa20.06■□□□□ 0.8
AC093227.1-201ENST00000588040 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
AC093227.1-201ENST00000588040 ZBTB22O15209 634 aa19.98■□□□□ 0.79
AC093227.1-201ENST00000588040 APLP2Q06481 763 aa19.98■□□□□ 0.79
AC093227.1-201ENST00000588040 CSRNP3Q8WYN3 585 aa19.85■□□□□ 0.77
AC093227.1-201ENST00000588040 MYCNP04198 464 aaPredicted RBP19.82■□□□□ 0.76
AC093227.1-201ENST00000588040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.7■□□□□ 0.74
AC093227.1-201ENST00000588040 HNRNPUL2Q1KMD3 747 aaKnown RBP19.7■□□□□ 0.74
AC093227.1-201ENST00000588040 SAMD1Q6SPF0 538 aaPredicted RBP19.62■□□□□ 0.73
AC093227.1-201ENST00000588040 PIP4P2Q8N4L2 257 aa19.44■□□□□ 0.7
AC093227.1-201ENST00000588040 HAX1O00165 279 aa19.42■□□□□ 0.7
AC093227.1-201ENST00000588040 ATXN8OSP0DMR3 200 aa19.41■□□□□ 0.7
AC093227.1-201ENST00000588040 AKT1S1Q96B36 256 aa19.37■□□□□ 0.69
AC093227.1-201ENST00000588040 POLA2Q14181 598 aa19.34■□□□□ 0.69
AC093227.1-201ENST00000588040 ATF5Q9Y2D1 282 aaPredicted RBP19.24■□□□□ 0.67
AC093227.1-201ENST00000588040 REM2Q8IYK8 340 aaPredicted RBP19.2■□□□□ 0.66
AC093227.1-201ENST00000588040 EVX2Q03828 476 aa19.13■□□□□ 0.65
AC093227.1-201ENST00000588040 FXR2P51116 673 aaKnown RBP eCLIP19.12■□□□□ 0.65
AC093227.1-201ENST00000588040 PITPNM1O00562 1244 aa19■□□□□ 0.63
AC093227.1-201ENST00000588040 LHX8Q68G74 356 aa18.92■□□□□ 0.62
AC093227.1-201ENST00000588040 ZBTB12Q9Y330 459 aaPredicted RBP18.84■□□□□ 0.61
AC093227.1-201ENST00000588040 PLSCR2Q9NRY7 297 aa18.78■□□□□ 0.6
AC093227.1-201ENST00000588040 OSCARQ8IYS5 282 aa18.77■□□□□ 0.6
AC093227.1-201ENST00000588040 GABBR2O75899 941 aa18.61■□□□□ 0.57
AC093227.1-201ENST00000588040 C19orf67A6NJJ6 358 aa18.56■□□□□ 0.56
AC093227.1-201ENST00000588040 FBLN2P98095 1184 aa18.5■□□□□ 0.55
AC093227.1-201ENST00000588040 PRKAR2AP13861 404 aaKnown RBP18.48■□□□□ 0.55
AC093227.1-201ENST00000588040 MKRN4PQ13434 485 aaPredicted RBP18.42■□□□□ 0.54
AC093227.1-201ENST00000588040 POTEIP0CG38 1075 aa18.22■□□□□ 0.51
AC093227.1-201ENST00000588040 SPDYE2BA6NHP3 402 aa18.17■□□□□ 0.5
AC093227.1-201ENST00000588040 SPDYE6P0CI01 402 aa18.17■□□□□ 0.5
AC093227.1-201ENST00000588040 SPDYE2Q495Y8 402 aa18.17■□□□□ 0.5
AC093227.1-201ENST00000588040 SPDYE1Q8NFV5 336 aaPredicted RBP18.17■□□□□ 0.5
AC093227.1-201ENST00000588040 CLEC11AQ9Y240 323 aa18.17■□□□□ 0.5
AC093227.1-201ENST00000588040 SPDYE4A6NLX3 237 aa18■□□□□ 0.47
AC093227.1-201ENST00000588040 ZNF692Q9BU19 519 aaPredicted RBP18■□□□□ 0.47
AC093227.1-201ENST00000588040 CHADLQ6NUI6 762 aa17.98■□□□□ 0.47
AC093227.1-201ENST00000588040 FKBP8Q14318 412 aa17.95■□□□□ 0.46
AC093227.1-201ENST00000588040 SSUH2Q9Y2M2 353 aa17.92■□□□□ 0.46
AC093227.1-201ENST00000588040 CLCN6P51797 869 aa17.87■□□□□ 0.45
AC093227.1-201ENST00000588040 POTEMA6NI47 508 aa17.86■□□□□ 0.45
AC093227.1-201ENST00000588040 CD44P16070 742 aaKnown RBP17.81■□□□□ 0.44
AC093227.1-201ENST00000588040 OTUD5Q96G74 571 aa17.79■□□□□ 0.44
AC093227.1-201ENST00000588040 DCBLD2Q96PD2 775 aa17.79■□□□□ 0.44
AC093227.1-201ENST00000588040 POTEGQ6S5H5 508 aa17.77■□□□□ 0.43
AC093227.1-201ENST00000588040 PABPN1Q86U42 306 aaKnown RBP eCLIP17.75■□□□□ 0.43
AC093227.1-201ENST00000588040 PRR29P0C7W0 189 aa17.7■□□□□ 0.42
AC093227.1-201ENST00000588040 PROM2Q8N271 834 aa17.7■□□□□ 0.42
AC093227.1-201ENST00000588040 PCDH10Q9P2E7 1040 aa17.67■□□□□ 0.42
AC093227.1-201ENST00000588040 FARP1Q9Y4F1 1045 aaPredicted RBP17.61■□□□□ 0.41
AC093227.1-201ENST00000588040 POTEB2H3BUK9 544 aa17.58■□□□□ 0.4
AC093227.1-201ENST00000588040 ZNF579Q8NAF0 562 aaKnown RBP17.5■□□□□ 0.39
AC093227.1-201ENST00000588040 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
AC093227.1-201ENST00000588040 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
AC093227.1-201ENST00000588040 GALR2O43603 387 aaPredicted RBP17.37■□□□□ 0.37
AC093227.1-201ENST00000588040 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
AC093227.1-201ENST00000588040 LCE2DQ5TA82 110 aaPredicted RBP17.23■□□□□ 0.35
AC093227.1-201ENST00000588040 PELP1Q8IZL8 1130 aaKnown RBP17.18■□□□□ 0.34
AC093227.1-201ENST00000588040 POTEJP0CG39 1038 aa17.13■□□□□ 0.33
AC093227.1-201ENST00000588040 VASPP50552 380 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms