RNA–Protein interactions for RNA: ENST00000547033.1

AC016993.1-201, humanhuman

TSL 3 BASIC

Gene AC016993.1, Length 1,258 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016993.1-201ENST00000547033 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
AC016993.1-201ENST00000547033 CHIC1Q5VXU3 224 aa29.45■■■□□ 2.31
AC016993.1-201ENST00000547033 SENP3Q9H4L4 574 aaPredicted RBP26.78■■□□□ 1.88
AC016993.1-201ENST00000547033 PHF23Q9BUL5 403 aaPredicted RBP26.37■■□□□ 1.81
AC016993.1-201ENST00000547033 FOXD1Q16676 465 aa24.96■■□□□ 1.59
AC016993.1-201ENST00000547033 POTEDQ86YR6 584 aa23.83■■□□□ 1.41
AC016993.1-201ENST00000547033 MSH5O43196 834 aa23.56■■□□□ 1.36
AC016993.1-201ENST00000547033 PLPPR3Q6T4P5 718 aa23.44■■□□□ 1.34
AC016993.1-201ENST00000547033 PIAS4Q8N2W9 510 aaPredicted RBP23.3■■□□□ 1.32
AC016993.1-201ENST00000547033 PPP6R1Q9UPN7 881 aa23.1■■□□□ 1.29
AC016993.1-201ENST00000547033 ADRA2BP18089 450 aa23.04■■□□□ 1.28
AC016993.1-201ENST00000547033 MAPK8IP2Q13387 824 aaPredicted RBP21.24■□□□□ 0.99
AC016993.1-201ENST00000547033 DMRT2Q9Y5R5 561 aa21.17■□□□□ 0.98
AC016993.1-201ENST00000547033 SCAF1Q9H7N4 1312 aaKnown RBP21.15■□□□□ 0.98
AC016993.1-201ENST00000547033 CACNB1Q02641 598 aaPredicted RBP20.56■□□□□ 0.88
AC016993.1-201ENST00000547033 PPP4R3CPQ6ZMV5 832 aa20.49■□□□□ 0.87
AC016993.1-201ENST00000547033 DCAF8L1A6NGE4 600 aa20.4■□□□□ 0.86
AC016993.1-201ENST00000547033 HOXD11P31277 338 aaPredicted RBP20.26■□□□□ 0.83
AC016993.1-201ENST00000547033 CNKSR2Q8WXI2 1034 aa20.18■□□□□ 0.82
AC016993.1-201ENST00000547033 RNF216Q9NWF9 866 aaPredicted RBP20.07■□□□□ 0.8
AC016993.1-201ENST00000547033 RNF39Q9H2S5 420 aa20.04■□□□□ 0.8
AC016993.1-201ENST00000547033 C1QBPQ07021 282 aaKnown RBP19.73■□□□□ 0.75
AC016993.1-201ENST00000547033 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
AC016993.1-201ENST00000547033 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
AC016993.1-201ENST00000547033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.39■□□□□ 0.69
AC016993.1-201ENST00000547033 NPM3O75607 178 aaKnown RBP19.32■□□□□ 0.68
AC016993.1-201ENST00000547033 KCNA4P22459 653 aa19.05■□□□□ 0.64
AC016993.1-201ENST00000547033 U3KPZ7 1027 aaPredicted RBP18.88■□□□□ 0.61
AC016993.1-201ENST00000547033 CAPN15O75808 1086 aa18.74■□□□□ 0.59
AC016993.1-201ENST00000547033 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
AC016993.1-201ENST00000547033 DSG3P32926 999 aa18.64■□□□□ 0.57
AC016993.1-201ENST00000547033 POTEHQ6S545 545 aa18.59■□□□□ 0.57
AC016993.1-201ENST00000547033 SLC4A2P04920 1241 aa18.5■□□□□ 0.55
AC016993.1-201ENST00000547033 APLP2Q06481 763 aa18.41■□□□□ 0.54
AC016993.1-201ENST00000547033 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
AC016993.1-201ENST00000547033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.32■□□□□ 0.52
AC016993.1-201ENST00000547033 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
AC016993.1-201ENST00000547033 ZNF219Q9P2Y4 722 aaPredicted RBP18.32■□□□□ 0.52
AC016993.1-201ENST00000547033 ABCB7O75027 752 aa18.26■□□□□ 0.51
AC016993.1-201ENST00000547033 SAMD1Q6SPF0 538 aaPredicted RBP18.19■□□□□ 0.5
AC016993.1-201ENST00000547033 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
AC016993.1-201ENST00000547033 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
AC016993.1-201ENST00000547033 RBM42Q9BTD8 480 aaKnown RBP17.85■□□□□ 0.45
AC016993.1-201ENST00000547033 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
AC016993.1-201ENST00000547033 POLA2Q14181 598 aa17.79■□□□□ 0.44
AC016993.1-201ENST00000547033 FOXD4L1Q9NU39 408 aa17.65■□□□□ 0.42
AC016993.1-201ENST00000547033 CHRDL2Q6WN34 429 aa17.6■□□□□ 0.41
AC016993.1-201ENST00000547033 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
AC016993.1-201ENST00000547033 ZBTB22O15209 634 aa17.46■□□□□ 0.39
AC016993.1-201ENST00000547033 ZBTB12Q9Y330 459 aaPredicted RBP17.43■□□□□ 0.38
AC016993.1-201ENST00000547033 AKT1S1Q96B36 256 aa17.35■□□□□ 0.37
AC016993.1-201ENST00000547033 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
AC016993.1-201ENST00000547033 CSRNP3Q8WYN3 585 aa17.2■□□□□ 0.34
AC016993.1-201ENST00000547033 SP7Q8TDD2 431 aaPredicted RBP17.19■□□□□ 0.34
AC016993.1-201ENST00000547033 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
AC016993.1-201ENST00000547033 PIP4P2Q8N4L2 257 aa17.06■□□□□ 0.32
AC016993.1-201ENST00000547033 ATXN8OSP0DMR3 200 aa17.05■□□□□ 0.32
AC016993.1-201ENST00000547033 PITPNM1O00562 1244 aa16.99■□□□□ 0.31
AC016993.1-201ENST00000547033 HAX1O00165 279 aa16.94■□□□□ 0.3
AC016993.1-201ENST00000547033 FBLN2P98095 1184 aa16.9■□□□□ 0.3
AC016993.1-201ENST00000547033 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
AC016993.1-201ENST00000547033 SPDYE2BA6NHP3 402 aa16.84■□□□□ 0.29
AC016993.1-201ENST00000547033 SPDYE6P0CI01 402 aa16.84■□□□□ 0.29
AC016993.1-201ENST00000547033 SPDYE2Q495Y8 402 aa16.84■□□□□ 0.29
AC016993.1-201ENST00000547033 EVX2Q03828 476 aa16.65■□□□□ 0.26
AC016993.1-201ENST00000547033 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
AC016993.1-201ENST00000547033 SPDYE1Q8NFV5 336 aaPredicted RBP16.64■□□□□ 0.25
AC016993.1-201ENST00000547033 CLEC11AQ9Y240 323 aa16.64■□□□□ 0.25
AC016993.1-201ENST00000547033 ZNF692Q9BU19 519 aaPredicted RBP16.62■□□□□ 0.25
AC016993.1-201ENST00000547033 PRKAR2AP13861 404 aaKnown RBP16.57■□□□□ 0.24
AC016993.1-201ENST00000547033 SSUH2Q9Y2M2 353 aa16.56■□□□□ 0.24
AC016993.1-201ENST00000547033 C19orf67A6NJJ6 358 aa16.36■□□□□ 0.21
AC016993.1-201ENST00000547033 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
AC016993.1-201ENST00000547033 PRR29P0C7W0 189 aa16.32■□□□□ 0.2
AC016993.1-201ENST00000547033 CHADLQ6NUI6 762 aa16.31■□□□□ 0.2
AC016993.1-201ENST00000547033 SLC24A1O60721 1099 aa16.25■□□□□ 0.19
AC016993.1-201ENST00000547033 GABBR2O75899 941 aa16.25■□□□□ 0.19
AC016993.1-201ENST00000547033 LHX8Q68G74 356 aa16.14■□□□□ 0.17
AC016993.1-201ENST00000547033 FARP1Q9Y4F1 1045 aaPredicted RBP16.05■□□□□ 0.16
AC016993.1-201ENST00000547033 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
AC016993.1-201ENST00000547033 RTN4Q9NQC3 1192 aaKnown RBP15.98■□□□□ 0.15
AC016993.1-201ENST00000547033 AMER1Q5JTC6 1135 aaPredicted RBP15.94■□□□□ 0.14
AC016993.1-201ENST00000547033 POTEIP0CG38 1075 aa15.88■□□□□ 0.13
AC016993.1-201ENST00000547033 CLCN6P51797 869 aa15.88■□□□□ 0.13
AC016993.1-201ENST00000547033 SPDYE4A6NLX3 237 aa15.86■□□□□ 0.13
AC016993.1-201ENST00000547033 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
AC016993.1-201ENST00000547033 CREBZFQ9NS37 354 aa15.8■□□□□ 0.12
AC016993.1-201ENST00000547033 DCBLD2Q96PD2 775 aa15.77■□□□□ 0.12
AC016993.1-201ENST00000547033 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.12
AC016993.1-201ENST00000547033 ZNF579Q8NAF0 562 aaKnown RBP15.75■□□□□ 0.11
AC016993.1-201ENST00000547033 FKBP8Q14318 412 aa15.64■□□□□ 0.09
AC016993.1-201ENST00000547033 PAK3O75914 559 aaPredicted RBP15.63■□□□□ 0.09
AC016993.1-201ENST00000547033 GALR2O43603 387 aaPredicted RBP15.58■□□□□ 0.08
AC016993.1-201ENST00000547033 NPM1P06748 294 aaKnown RBP eCLIP15.57■□□□□ 0.08
AC016993.1-201ENST00000547033 PLSCR2Q9NRY7 297 aa15.57■□□□□ 0.08
AC016993.1-201ENST00000547033 PHF12Q96QT6 1004 aa15.51■□□□□ 0.07
AC016993.1-201ENST00000547033 MNX1P50219 401 aaPredicted RBP15.46■□□□□ 0.07
AC016993.1-201ENST00000547033 PROM2Q8N271 834 aa15.45■□□□□ 0.06
AC016993.1-201ENST00000547033 OTUD5Q96G74 571 aa15.4■□□□□ 0.06
AC016993.1-201ENST00000547033 POTEB2H3BUK9 544 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms