RNA–Protein interactions for RNA: ENST00000506347.2

PABPC1P1-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 1, humanhuman

BASIC

Gene PABPC1P1, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P1-201ENST00000506347 AEBP2Q6ZN18 517 aaPredicted RBP18.21■□□□□ 0.51
PABPC1P1-201ENST00000506347 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
PABPC1P1-201ENST00000506347 PHF23Q9BUL5 403 aaPredicted RBP15.53■□□□□ 0.08
PABPC1P1-201ENST00000506347 NISCHQ9Y2I1 1504 aa15.43■□□□□ 0.06
PABPC1P1-201ENST00000506347 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
PABPC1P1-201ENST00000506347 FOXD1Q16676 465 aa14.35□□□□□ -0.11
PABPC1P1-201ENST00000506347 PLPPR3Q6T4P5 718 aa14.23□□□□□ -0.13
PABPC1P1-201ENST00000506347 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
PABPC1P1-201ENST00000506347 ADRA2BP18089 450 aa13.74□□□□□ -0.21
PABPC1P1-201ENST00000506347 ABCC9O60706 1549 aa13.49□□□□□ -0.25
PABPC1P1-201ENST00000506347 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
PABPC1P1-201ENST00000506347 CCDC180Q9P1Z9 1646 aa13.46□□□□□ -0.26
PABPC1P1-201ENST00000506347 MSH5O43196 834 aa13.19□□□□□ -0.3
PABPC1P1-201ENST00000506347 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
PABPC1P1-201ENST00000506347 ZCCHC6Q5VYS8 1495 aaKnown RBP13.09□□□□□ -0.31
PABPC1P1-201ENST00000506347 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
PABPC1P1-201ENST00000506347 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
PABPC1P1-201ENST00000506347 MYO15BQ96JP2 1530 aa12.6□□□□□ -0.39
PABPC1P1-201ENST00000506347 PPP4R3CPQ6ZMV5 832 aa12.57□□□□□ -0.4
PABPC1P1-201ENST00000506347 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.4
PABPC1P1-201ENST00000506347 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.41
PABPC1P1-201ENST00000506347 PABPN1Q86U42 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
PABPC1P1-201ENST00000506347 SCAF1Q9H7N4 1312 aaKnown RBP12.45□□□□□ -0.42
PABPC1P1-201ENST00000506347 UNC13AQ9UPW8 1703 aa12.38□□□□□ -0.43
PABPC1P1-201ENST00000506347 NACADO15069 1562 aa12.36□□□□□ -0.43
PABPC1P1-201ENST00000506347 DNAJC5Q9H3Z4 198 aa12.29□□□□□ -0.44
PABPC1P1-201ENST00000506347 BICRAQ9NZM4 1560 aa12.28□□□□□ -0.44
PABPC1P1-201ENST00000506347 DCAF8L2P0C7V8 631 aa12.28□□□□□ -0.44
PABPC1P1-201ENST00000506347 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
PABPC1P1-201ENST00000506347 POTEDQ86YR6 584 aa12.27□□□□□ -0.45
PABPC1P1-201ENST00000506347 SUPT5HO00267 1087 aaKnown RBP12.25□□□□□ -0.45
PABPC1P1-201ENST00000506347 SCRIBQ14160 1630 aa12.25□□□□□ -0.45
PABPC1P1-201ENST00000506347 CNKSR2Q8WXI2 1034 aa12.2□□□□□ -0.46
PABPC1P1-201ENST00000506347 KCNA4P22459 653 aa12.19□□□□□ -0.46
PABPC1P1-201ENST00000506347 CECR2Q9BXF3 1484 aa12.15□□□□□ -0.46
PABPC1P1-201ENST00000506347 NCBP3Q53F19 620 aaKnown RBP12.15□□□□□ -0.46
PABPC1P1-201ENST00000506347 CC2D2AQ9P2K1 1620 aa12.15□□□□□ -0.47
PABPC1P1-201ENST00000506347 NPM3O75607 178 aaKnown RBP12.04□□□□□ -0.48
PABPC1P1-201ENST00000506347 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
PABPC1P1-201ENST00000506347 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
PABPC1P1-201ENST00000506347 RNF216Q9NWF9 866 aaPredicted RBP11.98□□□□□ -0.49
PABPC1P1-201ENST00000506347 HOXD11P31277 338 aaPredicted RBP11.97□□□□□ -0.49
PABPC1P1-201ENST00000506347 BAZ1AQ9NRL2 1556 aaPredicted RBP11.94□□□□□ -0.5
PABPC1P1-201ENST00000506347 MROH2BQ7Z745 1585 aa11.88□□□□□ -0.51
PABPC1P1-201ENST00000506347 SMARCA4P51532 1647 aa11.83□□□□□ -0.52
PABPC1P1-201ENST00000506347 WIZO95785 1651 aa11.82□□□□□ -0.52
PABPC1P1-201ENST00000506347 DCAF8L1A6NGE4 600 aa11.8□□□□□ -0.52
PABPC1P1-201ENST00000506347 TOP2AP11388 1531 aaKnown RBP11.8□□□□□ -0.52
PABPC1P1-201ENST00000506347 CUX2O14529 1486 aa11.73□□□□□ -0.53
PABPC1P1-201ENST00000506347 PEG3Q9GZU2 1588 aa11.72□□□□□ -0.53
PABPC1P1-201ENST00000506347 SMARCA2P51531 1590 aa11.67□□□□□ -0.54
PABPC1P1-201ENST00000506347 TRIM41Q8WV44 630 aa11.63□□□□□ -0.55
PABPC1P1-201ENST00000506347 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
PABPC1P1-201ENST00000506347 SLC4A1APQ9BWU0 796 aaKnown RBP11.55□□□□□ -0.56
PABPC1P1-201ENST00000506347 CCDC88BA6NC98 1476 aa11.55□□□□□ -0.56
PABPC1P1-201ENST00000506347 NESP48681 1621 aa11.48□□□□□ -0.57
PABPC1P1-201ENST00000506347 ATAD2BQ9ULI0 1458 aa11.47□□□□□ -0.57
PABPC1P1-201ENST00000506347 EEA1Q15075 1411 aa11.46□□□□□ -0.57
PABPC1P1-201ENST00000506347 HMGXB3Q12766 1538 aa11.45□□□□□ -0.58
PABPC1P1-201ENST00000506347 THOC2Q8NI27 1593 aaKnown RBP11.45□□□□□ -0.58
PABPC1P1-201ENST00000506347 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
PABPC1P1-201ENST00000506347 ABCC8Q09428 1581 aa11.43□□□□□ -0.58
PABPC1P1-201ENST00000506347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.43□□□□□ -0.58
PABPC1P1-201ENST00000506347 LOC105371045A0A1W2PR82 267 aa11.42□□□□□ -0.58
PABPC1P1-201ENST00000506347 SLC4A2P04920 1241 aa11.41□□□□□ -0.58
PABPC1P1-201ENST00000506347 HRCP23327 699 aa11.4□□□□□ -0.58
PABPC1P1-201ENST00000506347 NCAPD3P42695 1498 aa11.36□□□□□ -0.59
PABPC1P1-201ENST00000506347 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
PABPC1P1-201ENST00000506347 WRNQ14191 1432 aaPredicted RBP eCLIP11.35□□□□□ -0.59
PABPC1P1-201ENST00000506347 TRIM26Q12899 539 aaPredicted RBP11.34□□□□□ -0.59
PABPC1P1-201ENST00000506347 PCGF6Q9BYE7 350 aa11.33□□□□□ -0.6
PABPC1P1-201ENST00000506347 RNF39Q9H2S5 420 aa11.33□□□□□ -0.6
PABPC1P1-201ENST00000506347 KIF21BO75037 1637 aa11.33□□□□□ -0.6
PABPC1P1-201ENST00000506347 BIVM-ERCC5R4GMW8 1640 aa11.32□□□□□ -0.6
PABPC1P1-201ENST00000506347 KIF21AQ7Z4S6 1674 aa11.32□□□□□ -0.6
PABPC1P1-201ENST00000506347 SYNJ1O43426 1573 aa11.32□□□□□ -0.6
PABPC1P1-201ENST00000506347 TOP2BQ02880 1626 aa11.3□□□□□ -0.6
PABPC1P1-201ENST00000506347 GOLGA3Q08378 1498 aa11.28□□□□□ -0.6
PABPC1P1-201ENST00000506347 FAM9AQ8IZU1 332 aaPredicted RBP11.26□□□□□ -0.61
PABPC1P1-201ENST00000506347 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
PABPC1P1-201ENST00000506347 TNIKQ9UKE5 1360 aa11.26□□□□□ -0.61
PABPC1P1-201ENST00000506347 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
PABPC1P1-201ENST00000506347 ZBTB22O15209 634 aa11.23□□□□□ -0.61
PABPC1P1-201ENST00000506347 SOGA1O94964 1423 aa11.23□□□□□ -0.61
PABPC1P1-201ENST00000506347 CEP162Q5TB80 1403 aa11.22□□□□□ -0.61
PABPC1P1-201ENST00000506347 LAMC3Q9Y6N6 1575 aa11.2□□□□□ -0.62
PABPC1P1-201ENST00000506347 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
PABPC1P1-201ENST00000506347 ERICH3Q5RHP9 1530 aa11.18□□□□□ -0.62
PABPC1P1-201ENST00000506347 CFTRP13569 1480 aa11.18□□□□□ -0.62
PABPC1P1-201ENST00000506347 C1QBPQ07021 282 aaKnown RBP11.16□□□□□ -0.62
PABPC1P1-201ENST00000506347 EHMT2Q96KQ7 1210 aa11.16□□□□□ -0.62
PABPC1P1-201ENST00000506347 ZEB1P37275 1124 aaPredicted RBP11.15□□□□□ -0.62
PABPC1P1-201ENST00000506347 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
PABPC1P1-201ENST00000506347 RUSC2Q8N2Y8 1516 aa11.14□□□□□ -0.63
PABPC1P1-201ENST00000506347 CACNB1Q02641 598 aaPredicted RBP11.13□□□□□ -0.63
PABPC1P1-201ENST00000506347 RIMBP3CA6NJZ7 1639 aa11.13□□□□□ -0.63
PABPC1P1-201ENST00000506347 RIMBP3BA6NNM3 1639 aa11.13□□□□□ -0.63
PABPC1P1-201ENST00000506347 RIMBP3Q9UFD9 1639 aa11.13□□□□□ -0.63
PABPC1P1-201ENST00000506347 WDR62O43379 1518 aa11.12□□□□□ -0.63
PABPC1P1-201ENST00000506347 CUX1P39880 1505 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms