RNA–Protein interactions for RNA: ENST00000510867.2

SNX18P23-201, Transcript of sorting nexin 18 pseudogene 23, humanhuman

BASIC

Gene SNX18P23, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P23-201ENST00000510867 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
SNX18P23-201ENST00000510867 NISCHQ9Y2I1 1504 aa15.99■□□□□ 0.15
SNX18P23-201ENST00000510867 CHIC1Q5VXU3 224 aa15.47■□□□□ 0.07
SNX18P23-201ENST00000510867 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
SNX18P23-201ENST00000510867 SENP3Q9H4L4 574 aaPredicted RBP14.09□□□□□ -0.15
SNX18P23-201ENST00000510867 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
SNX18P23-201ENST00000510867 ABCC9O60706 1549 aa13.65□□□□□ -0.22
SNX18P23-201ENST00000510867 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
SNX18P23-201ENST00000510867 ZCCHC6Q5VYS8 1495 aaKnown RBP13.33□□□□□ -0.28
SNX18P23-201ENST00000510867 FOXD1Q16676 465 aa13.26□□□□□ -0.29
SNX18P23-201ENST00000510867 NACADO15069 1562 aa13.24□□□□□ -0.29
SNX18P23-201ENST00000510867 RB1CC1Q8TDY2 1594 aa13.22□□□□□ -0.29
SNX18P23-201ENST00000510867 DCAF1Q9Y4B6 1507 aa13.22□□□□□ -0.29
SNX18P23-201ENST00000510867 MYO15BQ96JP2 1530 aa13.19□□□□□ -0.3
SNX18P23-201ENST00000510867 SCRIBQ14160 1630 aa12.91□□□□□ -0.34
SNX18P23-201ENST00000510867 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.34
SNX18P23-201ENST00000510867 PABPN1Q86U42 306 aaKnown RBP eCLIP12.83□□□□□ -0.36
SNX18P23-201ENST00000510867 SHROOM4Q9ULL8 1493 aa12.81□□□□□ -0.36
SNX18P23-201ENST00000510867 BICRAQ9NZM4 1560 aa12.75□□□□□ -0.37
SNX18P23-201ENST00000510867 POTEDQ86YR6 584 aa12.65□□□□□ -0.38
SNX18P23-201ENST00000510867 DNAJC5BQ9UF47 199 aa12.47□□□□□ -0.41
SNX18P23-201ENST00000510867 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
SNX18P23-201ENST00000510867 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
SNX18P23-201ENST00000510867 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
SNX18P23-201ENST00000510867 MSH5O43196 834 aa12.39□□□□□ -0.43
SNX18P23-201ENST00000510867 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
SNX18P23-201ENST00000510867 CC2D2AQ9P2K1 1620 aa12.34□□□□□ -0.43
SNX18P23-201ENST00000510867 MROH2BQ7Z745 1585 aa12.31□□□□□ -0.44
SNX18P23-201ENST00000510867 PIAS4Q8N2W9 510 aaPredicted RBP12.29□□□□□ -0.44
SNX18P23-201ENST00000510867 PPP6R1Q9UPN7 881 aa12.26□□□□□ -0.45
SNX18P23-201ENST00000510867 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
SNX18P23-201ENST00000510867 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
SNX18P23-201ENST00000510867 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
SNX18P23-201ENST00000510867 WIZO95785 1651 aa12.22□□□□□ -0.45
SNX18P23-201ENST00000510867 NCAPD3P42695 1498 aa12.21□□□□□ -0.45
SNX18P23-201ENST00000510867 SUPT5HO00267 1087 aaKnown RBP12.21□□□□□ -0.45
SNX18P23-201ENST00000510867 PEG3Q9GZU2 1588 aa12.21□□□□□ -0.46
SNX18P23-201ENST00000510867 PLPPR3Q6T4P5 718 aa12.18□□□□□ -0.46
SNX18P23-201ENST00000510867 BAZ1BQ9UIG0 1483 aaKnown RBP12.18□□□□□ -0.46
SNX18P23-201ENST00000510867 ADRA2BP18089 450 aa12.17□□□□□ -0.46
SNX18P23-201ENST00000510867 HMGXB3Q12766 1538 aa12.15□□□□□ -0.46
SNX18P23-201ENST00000510867 TOP2AP11388 1531 aaKnown RBP12.08□□□□□ -0.48
SNX18P23-201ENST00000510867 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.49
SNX18P23-201ENST00000510867 CADPSQ9ULU8 1353 aa11.9□□□□□ -0.5
SNX18P23-201ENST00000510867 LAMC3Q9Y6N6 1575 aa11.87□□□□□ -0.51
SNX18P23-201ENST00000510867 NESP48681 1621 aa11.86□□□□□ -0.51
SNX18P23-201ENST00000510867 CFTRP13569 1480 aa11.83□□□□□ -0.52
SNX18P23-201ENST00000510867 PDS5BQ9NTI5 1447 aa11.81□□□□□ -0.52
SNX18P23-201ENST00000510867 PRDM2Q13029 1718 aa11.77□□□□□ -0.52
SNX18P23-201ENST00000510867 ERCC6Q03468 1493 aa11.77□□□□□ -0.52
SNX18P23-201ENST00000510867 FANCD2Q9BXW9 1451 aa11.74□□□□□ -0.53
SNX18P23-201ENST00000510867 KIF21AQ7Z4S6 1674 aa11.72□□□□□ -0.53
SNX18P23-201ENST00000510867 CEP164Q9UPV0 1460 aa11.71□□□□□ -0.53
SNX18P23-201ENST00000510867 MRC2Q9UBG0 1479 aa11.64□□□□□ -0.55
SNX18P23-201ENST00000510867 ABCC8Q09428 1581 aa11.62□□□□□ -0.55
SNX18P23-201ENST00000510867 THOC2Q8NI27 1593 aaKnown RBP11.59□□□□□ -0.55
SNX18P23-201ENST00000510867 URB2Q14146 1524 aaKnown RBP11.58□□□□□ -0.56
SNX18P23-201ENST00000510867 WRNQ14191 1432 aaPredicted RBP eCLIP11.58□□□□□ -0.56
SNX18P23-201ENST00000510867 DNMBPQ6XZF7 1577 aa11.57□□□□□ -0.56
SNX18P23-201ENST00000510867 WDR62O43379 1518 aa11.56□□□□□ -0.56
SNX18P23-201ENST00000510867 TOPBP1Q92547 1522 aa11.56□□□□□ -0.56
SNX18P23-201ENST00000510867 TRIM41Q8WV44 630 aa11.54□□□□□ -0.56
SNX18P23-201ENST00000510867 CUX2O14529 1486 aa11.54□□□□□ -0.56
SNX18P23-201ENST00000510867 CUX1P39880 1505 aa11.54□□□□□ -0.56
SNX18P23-201ENST00000510867 TOP2BQ02880 1626 aa11.5□□□□□ -0.57
SNX18P23-201ENST00000510867 BIVM-ERCC5R4GMW8 1640 aa11.5□□□□□ -0.57
SNX18P23-201ENST00000510867 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
SNX18P23-201ENST00000510867 SOGA1O94964 1423 aa11.49□□□□□ -0.57
SNX18P23-201ENST00000510867 FGD5Q6ZNL6 1462 aa11.49□□□□□ -0.57
SNX18P23-201ENST00000510867 POLA1P09884 1462 aaPredicted RBP11.47□□□□□ -0.57
SNX18P23-201ENST00000510867 IFT140Q96RY7 1462 aa11.46□□□□□ -0.57
SNX18P23-201ENST00000510867 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
SNX18P23-201ENST00000510867 TARBP1Q13395 1621 aaKnown RBP11.4□□□□□ -0.58
SNX18P23-201ENST00000510867 ABCA10Q8WWZ4 1543 aa11.38□□□□□ -0.59
SNX18P23-201ENST00000510867 TDRD9Q8NDG6 1382 aaKnown RBP11.38□□□□□ -0.59
SNX18P23-201ENST00000510867 AQRO60306 1485 aaKnown RBP eCLIP11.37□□□□□ -0.59
SNX18P23-201ENST00000510867 ZNF608Q9ULD9 1512 aaPredicted RBP11.36□□□□□ -0.59
SNX18P23-201ENST00000510867 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
SNX18P23-201ENST00000510867 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
SNX18P23-201ENST00000510867 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
SNX18P23-201ENST00000510867 EIF4G3O43432 1585 aaKnown RBP11.32□□□□□ -0.6
SNX18P23-201ENST00000510867 GRIN2BQ13224 1484 aa11.3□□□□□ -0.6
SNX18P23-201ENST00000510867 ABCA5Q8WWZ7 1642 aa11.29□□□□□ -0.6
SNX18P23-201ENST00000510867 FAM9AQ8IZU1 332 aaPredicted RBP11.29□□□□□ -0.6
SNX18P23-201ENST00000510867 PBRM1Q86U86 1689 aa11.28□□□□□ -0.6
SNX18P23-201ENST00000510867 MAPK8IP2Q13387 824 aaPredicted RBP11.28□□□□□ -0.6
SNX18P23-201ENST00000510867 FBLN2P98095 1184 aa11.27□□□□□ -0.61
SNX18P23-201ENST00000510867 DNAJC5Q9H3Z4 198 aa11.27□□□□□ -0.61
SNX18P23-201ENST00000510867 EEA1Q15075 1411 aa11.26□□□□□ -0.61
SNX18P23-201ENST00000510867 RUSC2Q8N2Y8 1516 aa11.26□□□□□ -0.61
SNX18P23-201ENST00000510867 CHMP7Q8WUX9 453 aaPredicted RBP11.26□□□□□ -0.61
SNX18P23-201ENST00000510867 CSRNP3Q8WYN3 585 aa11.26□□□□□ -0.61
SNX18P23-201ENST00000510867 IGF1RP08069 1367 aa11.26□□□□□ -0.61
SNX18P23-201ENST00000510867 ERICH3Q5RHP9 1530 aa11.25□□□□□ -0.61
SNX18P23-201ENST00000510867 SNAPC4Q5SXM2 1469 aa11.24□□□□□ -0.61
SNX18P23-201ENST00000510867 MAGI1Q96QZ7 1491 aaPredicted RBP11.24□□□□□ -0.61
SNX18P23-201ENST00000510867 CARMIL1Q5VZK9 1371 aa11.22□□□□□ -0.61
SNX18P23-201ENST00000510867 FHAD1B1AJZ9 1412 aa11.21□□□□□ -0.61
SNX18P23-201ENST00000510867 CUL7Q14999 1698 aa11.2□□□□□ -0.62
SNX18P23-201ENST00000510867 OSCARQ8IYS5 282 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms