RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 AEBP2Q6ZN18 517 aaPredicted RBP30.99■■■□□ 2.55
LINC00871-204ENST00000556886 CHIC1Q5VXU3 224 aa30.34■■■□□ 2.45
LINC00871-204ENST00000556886 PHF23Q9BUL5 403 aaPredicted RBP26.73■■□□□ 1.87
LINC00871-204ENST00000556886 SENP3Q9H4L4 574 aaPredicted RBP26.23■■□□□ 1.79
LINC00871-204ENST00000556886 PLPPR3Q6T4P5 718 aa24.68■■□□□ 1.54
LINC00871-204ENST00000556886 FOXD1Q16676 465 aa24.36■■□□□ 1.49
LINC00871-204ENST00000556886 PPP6R1Q9UPN7 881 aa23.56■■□□□ 1.36
LINC00871-204ENST00000556886 ADRA2BP18089 450 aa23.54■■□□□ 1.36
LINC00871-204ENST00000556886 PIAS4Q8N2W9 510 aaPredicted RBP23■■□□□ 1.27
LINC00871-204ENST00000556886 POTEDQ86YR6 584 aa22.99■■□□□ 1.27
LINC00871-204ENST00000556886 MSH5O43196 834 aa22.81■■□□□ 1.24
LINC00871-204ENST00000556886 PPP4R3CPQ6ZMV5 832 aa21.78■■□□□ 1.08
LINC00871-204ENST00000556886 SCAF1Q9H7N4 1312 aaKnown RBP21.45■■□□□ 1.02
LINC00871-204ENST00000556886 KCNA4P22459 653 aa21.44■■□□□ 1.02
LINC00871-204ENST00000556886 MAPK8IP2Q13387 824 aaPredicted RBP21.32■■□□□ 1
LINC00871-204ENST00000556886 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
LINC00871-204ENST00000556886 CNKSR2Q8WXI2 1034 aa21.12■□□□□ 0.97
LINC00871-204ENST00000556886 DMRT2Q9Y5R5 561 aa20.97■□□□□ 0.95
LINC00871-204ENST00000556886 NPM3O75607 178 aaKnown RBP20.94■□□□□ 0.94
LINC00871-204ENST00000556886 RNF216Q9NWF9 866 aaPredicted RBP20.67■□□□□ 0.9
LINC00871-204ENST00000556886 HOXD11P31277 338 aaPredicted RBP20.57■□□□□ 0.88
LINC00871-204ENST00000556886 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
LINC00871-204ENST00000556886 DNAJC5BQ9UF47 199 aa20.25■□□□□ 0.83
LINC00871-204ENST00000556886 DCAF8L1A6NGE4 600 aa20.07■□□□□ 0.8
LINC00871-204ENST00000556886 EHMT2Q96KQ7 1210 aa20■□□□□ 0.79
LINC00871-204ENST00000556886 CACNB1Q02641 598 aaPredicted RBP19.87■□□□□ 0.77
LINC00871-204ENST00000556886 SLC4A2P04920 1241 aa19.76■□□□□ 0.75
LINC00871-204ENST00000556886 ZBTB22O15209 634 aa19.74■□□□□ 0.75
LINC00871-204ENST00000556886 CSRNP3Q8WYN3 585 aa19.71■□□□□ 0.75
LINC00871-204ENST00000556886 FOXD4L1Q9NU39 408 aa19.66■□□□□ 0.74
LINC00871-204ENST00000556886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.61■□□□□ 0.73
LINC00871-204ENST00000556886 U3KPZ7 1027 aaPredicted RBP19.33■□□□□ 0.68
LINC00871-204ENST00000556886 MYCNP04198 464 aaPredicted RBP19.32■□□□□ 0.68
LINC00871-204ENST00000556886 RNF39Q9H2S5 420 aa19.3■□□□□ 0.68
LINC00871-204ENST00000556886 C1QBPQ07021 282 aaKnown RBP19.08■□□□□ 0.64
LINC00871-204ENST00000556886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
LINC00871-204ENST00000556886 HNRNPUL2Q1KMD3 747 aaKnown RBP19.06■□□□□ 0.64
LINC00871-204ENST00000556886 SAMD1Q6SPF0 538 aaPredicted RBP19.02■□□□□ 0.64
LINC00871-204ENST00000556886 ATXN8OSP0DMR3 200 aa18.93■□□□□ 0.62
LINC00871-204ENST00000556886 ATF5Q9Y2D1 282 aaPredicted RBP18.85■□□□□ 0.61
LINC00871-204ENST00000556886 APLP2Q06481 763 aa18.82■□□□□ 0.6
LINC00871-204ENST00000556886 SPINK5Q9NQ38 1064 aaPredicted RBP18.77■□□□□ 0.6
LINC00871-204ENST00000556886 CAPN15O75808 1086 aa18.66■□□□□ 0.58
LINC00871-204ENST00000556886 TRHP20396 242 aaPredicted RBP18.61■□□□□ 0.57
LINC00871-204ENST00000556886 ZNF219Q9P2Y4 722 aaPredicted RBP18.58■□□□□ 0.56
LINC00871-204ENST00000556886 ABCB7O75027 752 aa18.34■□□□□ 0.53
LINC00871-204ENST00000556886 DSG3P32926 999 aa18.33■□□□□ 0.52
LINC00871-204ENST00000556886 POLA2Q14181 598 aa18.33■□□□□ 0.52
LINC00871-204ENST00000556886 MKRN4PQ13434 485 aaPredicted RBP18.03■□□□□ 0.48
LINC00871-204ENST00000556886 FBLN2P98095 1184 aa17.99■□□□□ 0.47
LINC00871-204ENST00000556886 ZBTB12Q9Y330 459 aaPredicted RBP17.99■□□□□ 0.47
LINC00871-204ENST00000556886 POTEHQ6S545 545 aa17.97■□□□□ 0.47
LINC00871-204ENST00000556886 FKBP8Q14318 412 aa17.81■□□□□ 0.44
LINC00871-204ENST00000556886 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
LINC00871-204ENST00000556886 SPDYE4A6NLX3 237 aa17.65■□□□□ 0.42
LINC00871-204ENST00000556886 SPDYE2BA6NHP3 402 aa17.54■□□□□ 0.4
LINC00871-204ENST00000556886 SPDYE6P0CI01 402 aa17.54■□□□□ 0.4
LINC00871-204ENST00000556886 SPDYE2Q495Y8 402 aa17.54■□□□□ 0.4
LINC00871-204ENST00000556886 ZNF692Q9BU19 519 aaPredicted RBP17.5■□□□□ 0.39
LINC00871-204ENST00000556886 SSUH2Q9Y2M2 353 aa17.43■□□□□ 0.38
LINC00871-204ENST00000556886 RBM42Q9BTD8 480 aaKnown RBP17.42■□□□□ 0.38
LINC00871-204ENST00000556886 PROM2Q8N271 834 aa17.37■□□□□ 0.37
LINC00871-204ENST00000556886 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
LINC00871-204ENST00000556886 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
LINC00871-204ENST00000556886 REM2Q8IYK8 340 aaPredicted RBP17.1■□□□□ 0.33
LINC00871-204ENST00000556886 FBXO3Q9UK99 471 aa17.08■□□□□ 0.32
LINC00871-204ENST00000556886 SPDYE1Q8NFV5 336 aaPredicted RBP16.99■□□□□ 0.31
LINC00871-204ENST00000556886 CHRDL2Q6WN34 429 aa16.97■□□□□ 0.31
LINC00871-204ENST00000556886 STAG3Q9UJ98 1225 aa16.97■□□□□ 0.31
LINC00871-204ENST00000556886 CLEC11AQ9Y240 323 aa16.94■□□□□ 0.3
LINC00871-204ENST00000556886 PITPNM1O00562 1244 aa16.92■□□□□ 0.3
LINC00871-204ENST00000556886 VASPP50552 380 aaPredicted RBP16.89■□□□□ 0.29
LINC00871-204ENST00000556886 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
LINC00871-204ENST00000556886 MIER1Q8N108 512 aa16.72■□□□□ 0.27
LINC00871-204ENST00000556886 PLCD3Q8N3E9 789 aa16.71■□□□□ 0.27
LINC00871-204ENST00000556886 IFNLR1Q8IU57 520 aaPredicted RBP16.68■□□□□ 0.26
LINC00871-204ENST00000556886 SP7Q8TDD2 431 aaPredicted RBP16.62■□□□□ 0.25
LINC00871-204ENST00000556886 CREBZFQ9NS37 354 aa16.61■□□□□ 0.25
LINC00871-204ENST00000556886 PLEKHG5O94827 1062 aa16.59■□□□□ 0.25
LINC00871-204ENST00000556886 FXR2P51116 673 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC00871-204ENST00000556886 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
LINC00871-204ENST00000556886 CHADLQ6NUI6 762 aa16.54■□□□□ 0.24
LINC00871-204ENST00000556886 PIP4P2Q8N4L2 257 aa16.5■□□□□ 0.23
LINC00871-204ENST00000556886 PRKAR2AP13861 404 aaKnown RBP16.49■□□□□ 0.23
LINC00871-204ENST00000556886 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
LINC00871-204ENST00000556886 MNX1P50219 401 aaPredicted RBP16.46■□□□□ 0.23
LINC00871-204ENST00000556886 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
LINC00871-204ENST00000556886 RTN4Q9NQC3 1192 aaKnown RBP16.41■□□□□ 0.22
LINC00871-204ENST00000556886 AMER1Q5JTC6 1135 aaPredicted RBP16.4■□□□□ 0.22
LINC00871-204ENST00000556886 FARP1Q9Y4F1 1045 aaPredicted RBP16.36■□□□□ 0.21
LINC00871-204ENST00000556886 HAX1O00165 279 aa16.34■□□□□ 0.21
LINC00871-204ENST00000556886 NPM1P06748 294 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC00871-204ENST00000556886 NUBP1P53384 320 aa16.3■□□□□ 0.2
LINC00871-204ENST00000556886 RASEFQ8IZ41 740 aa16.21■□□□□ 0.19
LINC00871-204ENST00000556886 CIZ1Q9ULV3 898 aaPredicted RBP16.18■□□□□ 0.18
LINC00871-204ENST00000556886 PKD2Q13563 968 aa16.17■□□□□ 0.18
LINC00871-204ENST00000556886 DCAF8Q5TAQ9 597 aa16.14■□□□□ 0.17
LINC00871-204ENST00000556886 FAM212AQ96EL1 285 aa16.14■□□□□ 0.17
LINC00871-204ENST00000556886 GSE1Q14687 1217 aa16.11■□□□□ 0.17
LINC00871-204ENST00000556886 TSPYL2Q9H2G4 693 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms