RNA–Protein interactions for RNA: ENST00000361056.3

MEPE-201, Transcript of matrix extracellular phosphoglycoprotein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MEPE, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEPE-201ENST00000361056 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
MEPE-201ENST00000361056 AEBP2Q6ZN18 517 aaPredicted RBP20.15■□□□□ 0.82
MEPE-201ENST00000361056 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
MEPE-201ENST00000361056 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
MEPE-201ENST00000361056 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
MEPE-201ENST00000361056 NISCHQ9Y2I1 1504 aa16.06■□□□□ 0.16
MEPE-201ENST00000361056 ADRA2BP18089 450 aa16.02■□□□□ 0.15
MEPE-201ENST00000361056 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
MEPE-201ENST00000361056 KCNA4P22459 653 aa15.8■□□□□ 0.12
MEPE-201ENST00000361056 PPP6R1Q9UPN7 881 aa15.76■□□□□ 0.11
MEPE-201ENST00000361056 FOXD1Q16676 465 aa15.58■□□□□ 0.08
MEPE-201ENST00000361056 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
MEPE-201ENST00000361056 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
MEPE-201ENST00000361056 PPP4R3CPQ6ZMV5 832 aa15.04■□□□□ -0
MEPE-201ENST00000361056 PIAS4Q8N2W9 510 aaPredicted RBP14.89□□□□□ -0.03
MEPE-201ENST00000361056 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
MEPE-201ENST00000361056 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
MEPE-201ENST00000361056 ZBTB22O15209 634 aa14.63□□□□□ -0.07
MEPE-201ENST00000361056 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
MEPE-201ENST00000361056 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
MEPE-201ENST00000361056 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
MEPE-201ENST00000361056 CCDC180Q9P1Z9 1646 aa14.1□□□□□ -0.15
MEPE-201ENST00000361056 MAPK8IP2Q13387 824 aaPredicted RBP14.09□□□□□ -0.15
MEPE-201ENST00000361056 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
MEPE-201ENST00000361056 SLC24A1O60721 1099 aa14□□□□□ -0.17
MEPE-201ENST00000361056 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
MEPE-201ENST00000361056 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
MEPE-201ENST00000361056 MSH5O43196 834 aa13.83□□□□□ -0.19
MEPE-201ENST00000361056 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
MEPE-201ENST00000361056 SLC4A2P04920 1241 aa13.73□□□□□ -0.21
MEPE-201ENST00000361056 FKBP8Q14318 412 aa13.65□□□□□ -0.22
MEPE-201ENST00000361056 ABCC9O60706 1549 aa13.58□□□□□ -0.24
MEPE-201ENST00000361056 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
MEPE-201ENST00000361056 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
MEPE-201ENST00000361056 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
MEPE-201ENST00000361056 ZCCHC6Q5VYS8 1495 aaKnown RBP13.44□□□□□ -0.26
MEPE-201ENST00000361056 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
MEPE-201ENST00000361056 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
MEPE-201ENST00000361056 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
MEPE-201ENST00000361056 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
MEPE-201ENST00000361056 NACADO15069 1562 aa13.17□□□□□ -0.3
MEPE-201ENST00000361056 MYO15BQ96JP2 1530 aa13.14□□□□□ -0.31
MEPE-201ENST00000361056 RB1CC1Q8TDY2 1594 aa13.13□□□□□ -0.31
MEPE-201ENST00000361056 SHROOM4Q9ULL8 1493 aa13.05□□□□□ -0.32
MEPE-201ENST00000361056 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
MEPE-201ENST00000361056 SCRIBQ14160 1630 aa13□□□□□ -0.33
MEPE-201ENST00000361056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.33
MEPE-201ENST00000361056 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
MEPE-201ENST00000361056 SAMD1Q6SPF0 538 aaPredicted RBP12.89□□□□□ -0.35
MEPE-201ENST00000361056 UNC13AQ9UPW8 1703 aa12.88□□□□□ -0.35
MEPE-201ENST00000361056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
MEPE-201ENST00000361056 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
MEPE-201ENST00000361056 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
MEPE-201ENST00000361056 ZNF219Q9P2Y4 722 aaPredicted RBP12.79□□□□□ -0.36
MEPE-201ENST00000361056 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
MEPE-201ENST00000361056 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
MEPE-201ENST00000361056 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
MEPE-201ENST00000361056 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
MEPE-201ENST00000361056 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
MEPE-201ENST00000361056 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
MEPE-201ENST00000361056 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
MEPE-201ENST00000361056 IFNLR1Q8IU57 520 aaPredicted RBP12.63□□□□□ -0.39
MEPE-201ENST00000361056 PROM2Q8N271 834 aa12.6□□□□□ -0.39
MEPE-201ENST00000361056 PRKCSHP14314 528 aaPredicted RBP12.59□□□□□ -0.39
MEPE-201ENST00000361056 PKD2Q13563 968 aa12.54□□□□□ -0.4
MEPE-201ENST00000361056 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
MEPE-201ENST00000361056 BCANQ96GW7 911 aa12.45□□□□□ -0.42
MEPE-201ENST00000361056 SUPT5HO00267 1087 aaKnown RBP12.44□□□□□ -0.42
MEPE-201ENST00000361056 MROH2BQ7Z745 1585 aa12.42□□□□□ -0.42
MEPE-201ENST00000361056 BAZ1AQ9NRL2 1556 aaPredicted RBP12.42□□□□□ -0.42
MEPE-201ENST00000361056 APLP2Q06481 763 aa12.41□□□□□ -0.42
MEPE-201ENST00000361056 SMARCA4P51532 1647 aa12.41□□□□□ -0.42
MEPE-201ENST00000361056 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
MEPE-201ENST00000361056 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
MEPE-201ENST00000361056 FBLN2P98095 1184 aa12.4□□□□□ -0.42
MEPE-201ENST00000361056 SPINK5Q9NQ38 1064 aaPredicted RBP12.4□□□□□ -0.42
MEPE-201ENST00000361056 RSF1Q96T23 1441 aaPredicted RBP12.38□□□□□ -0.43
MEPE-201ENST00000361056 POLA2Q14181 598 aa12.38□□□□□ -0.43
MEPE-201ENST00000361056 EIF4G1Q04637 1599 aaKnown RBP12.38□□□□□ -0.43
MEPE-201ENST00000361056 VSIG10Q8N0Z9 540 aa12.35□□□□□ -0.43
MEPE-201ENST00000361056 KDM2AQ9Y2K7 1162 aa12.35□□□□□ -0.43
MEPE-201ENST00000361056 WIZO95785 1651 aa12.33□□□□□ -0.44
MEPE-201ENST00000361056 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
MEPE-201ENST00000361056 CC2D2AQ9P2K1 1620 aa12.26□□□□□ -0.45
MEPE-201ENST00000361056 TPRNQ4KMQ1 711 aa12.25□□□□□ -0.45
MEPE-201ENST00000361056 PAXIP1Q6ZW49 1069 aaPredicted RBP12.25□□□□□ -0.45
MEPE-201ENST00000361056 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
MEPE-201ENST00000361056 CFAP44Q96MT7 982 aa12.25□□□□□ -0.45
MEPE-201ENST00000361056 ATAD2BQ9ULI0 1458 aa12.24□□□□□ -0.45
MEPE-201ENST00000361056 KLHL34Q8N239 644 aa12.23□□□□□ -0.45
MEPE-201ENST00000361056 SMARCA2P51531 1590 aa12.23□□□□□ -0.45
MEPE-201ENST00000361056 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.45
MEPE-201ENST00000361056 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.21□□□□□ -0.45
MEPE-201ENST00000361056 PEG3Q9GZU2 1588 aa12.21□□□□□ -0.45
MEPE-201ENST00000361056 CAPN15O75808 1086 aa12.2□□□□□ -0.46
MEPE-201ENST00000361056 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
MEPE-201ENST00000361056 RGL2O15211 777 aa12.19□□□□□ -0.46
MEPE-201ENST00000361056 BAZ1BQ9UIG0 1483 aaKnown RBP12.18□□□□□ -0.46
MEPE-201ENST00000361056 TOP2AP11388 1531 aaKnown RBP12.17□□□□□ -0.46
MEPE-201ENST00000361056 ABCB7O75027 752 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms