RNA–Protein interactions for RNA: ENST00000225831.4

CCL2-201, Transcript of C-C motif chemokine ligand 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL2, Length 741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2-201ENST00000225831 AEBP2Q6ZN18 517 aaPredicted RBP29.63■■■□□ 2.33
CCL2-201ENST00000225831 CHIC1Q5VXU3 224 aa27.65■■■□□ 2.02
CCL2-201ENST00000225831 SENP3Q9H4L4 574 aaPredicted RBP25.41■■□□□ 1.66
CCL2-201ENST00000225831 PHF23Q9BUL5 403 aaPredicted RBP24.94■■□□□ 1.58
CCL2-201ENST00000225831 FOXD1Q16676 465 aa23.8■■□□□ 1.4
CCL2-201ENST00000225831 POTEDQ86YR6 584 aa23.66■■□□□ 1.38
CCL2-201ENST00000225831 MSH5O43196 834 aa22.63■■□□□ 1.21
CCL2-201ENST00000225831 PIAS4Q8N2W9 510 aaPredicted RBP21.97■■□□□ 1.11
CCL2-201ENST00000225831 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
CCL2-201ENST00000225831 ADRA2BP18089 450 aa21.37■■□□□ 1.01
CCL2-201ENST00000225831 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
CCL2-201ENST00000225831 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
CCL2-201ENST00000225831 CACNB1Q02641 598 aaPredicted RBP19.94■□□□□ 0.78
CCL2-201ENST00000225831 MAPK8IP2Q13387 824 aaPredicted RBP19.92■□□□□ 0.78
CCL2-201ENST00000225831 SCAF1Q9H7N4 1312 aaKnown RBP19.58■□□□□ 0.73
CCL2-201ENST00000225831 RNF39Q9H2S5 420 aa19.24■□□□□ 0.67
CCL2-201ENST00000225831 DCAF8L1A6NGE4 600 aa19.12■□□□□ 0.65
CCL2-201ENST00000225831 HOXD11P31277 338 aaPredicted RBP18.95■□□□□ 0.62
CCL2-201ENST00000225831 C1QBPQ07021 282 aaKnown RBP18.9■□□□□ 0.62
CCL2-201ENST00000225831 PPP4R3CPQ6ZMV5 832 aa18.63■□□□□ 0.57
CCL2-201ENST00000225831 RNF216Q9NWF9 866 aaPredicted RBP18.53■□□□□ 0.56
CCL2-201ENST00000225831 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
CCL2-201ENST00000225831 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
CCL2-201ENST00000225831 POTEHQ6S545 545 aa18.35■□□□□ 0.53
CCL2-201ENST00000225831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCL2-201ENST00000225831 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
CCL2-201ENST00000225831 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
CCL2-201ENST00000225831 DSG3P32926 999 aa17.69■□□□□ 0.42
CCL2-201ENST00000225831 KCNA4P22459 653 aa17.58■□□□□ 0.4
CCL2-201ENST00000225831 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
CCL2-201ENST00000225831 U3KPZ7 1027 aaPredicted RBP17.52■□□□□ 0.4
CCL2-201ENST00000225831 CAPN15O75808 1086 aa17.5■□□□□ 0.39
CCL2-201ENST00000225831 ABCB7O75027 752 aa17.01■□□□□ 0.31
CCL2-201ENST00000225831 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
CCL2-201ENST00000225831 ZNF219Q9P2Y4 722 aaPredicted RBP16.99■□□□□ 0.31
CCL2-201ENST00000225831 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
CCL2-201ENST00000225831 APLP2Q06481 763 aa16.91■□□□□ 0.3
CCL2-201ENST00000225831 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
CCL2-201ENST00000225831 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
CCL2-201ENST00000225831 SP7Q8TDD2 431 aaPredicted RBP16.76■□□□□ 0.27
CCL2-201ENST00000225831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
CCL2-201ENST00000225831 HNRNPUL2Q1KMD3 747 aaKnown RBP16.69■□□□□ 0.26
CCL2-201ENST00000225831 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
CCL2-201ENST00000225831 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
CCL2-201ENST00000225831 POLA2Q14181 598 aa16.36■□□□□ 0.21
CCL2-201ENST00000225831 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
CCL2-201ENST00000225831 MYCNP04198 464 aaPredicted RBP16.31■□□□□ 0.2
CCL2-201ENST00000225831 PIP4P2Q8N4L2 257 aa16.28■□□□□ 0.2
CCL2-201ENST00000225831 NISCHQ9Y2I1 1504 aa16.25■□□□□ 0.19
CCL2-201ENST00000225831 FOXD4L1Q9NU39 408 aa16.25■□□□□ 0.19
CCL2-201ENST00000225831 ZBTB22O15209 634 aa16.22■□□□□ 0.19
CCL2-201ENST00000225831 HAX1O00165 279 aa16.2■□□□□ 0.18
CCL2-201ENST00000225831 REM2Q8IYK8 340 aaPredicted RBP16.15■□□□□ 0.18
CCL2-201ENST00000225831 ATF5Q9Y2D1 282 aaPredicted RBP16.09■□□□□ 0.17
CCL2-201ENST00000225831 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCL2-201ENST00000225831 PITPNM1O00562 1244 aa15.98■□□□□ 0.15
CCL2-201ENST00000225831 ZBTB12Q9Y330 459 aaPredicted RBP15.98■□□□□ 0.15
CCL2-201ENST00000225831 EVX2Q03828 476 aa15.97■□□□□ 0.15
CCL2-201ENST00000225831 OSCARQ8IYS5 282 aa15.86■□□□□ 0.13
CCL2-201ENST00000225831 LHX8Q68G74 356 aa15.7■□□□□ 0.1
CCL2-201ENST00000225831 ATXN8OSP0DMR3 200 aa15.66■□□□□ 0.1
CCL2-201ENST00000225831 C19orf67A6NJJ6 358 aa15.59■□□□□ 0.09
CCL2-201ENST00000225831 CSRNP3Q8WYN3 585 aa15.58■□□□□ 0.08
CCL2-201ENST00000225831 GABBR2O75899 941 aa15.56■□□□□ 0.08
CCL2-201ENST00000225831 PRKAR2AP13861 404 aaKnown RBP15.54■□□□□ 0.08
CCL2-201ENST00000225831 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
CCL2-201ENST00000225831 SPDYE2BA6NHP3 402 aa15.42■□□□□ 0.06
CCL2-201ENST00000225831 SPDYE6P0CI01 402 aa15.42■□□□□ 0.06
CCL2-201ENST00000225831 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
CCL2-201ENST00000225831 PLSCR2Q9NRY7 297 aa15.4■□□□□ 0.06
CCL2-201ENST00000225831 SPDYE1Q8NFV5 336 aaPredicted RBP15.36■□□□□ 0.05
CCL2-201ENST00000225831 MKRN4PQ13434 485 aaPredicted RBP15.32■□□□□ 0.04
CCL2-201ENST00000225831 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
CCL2-201ENST00000225831 POTEIP0CG38 1075 aa15.25■□□□□ 0.03
CCL2-201ENST00000225831 FBLN2P98095 1184 aa15.24■□□□□ 0.03
CCL2-201ENST00000225831 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
CCL2-201ENST00000225831 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
CCL2-201ENST00000225831 CLCN6P51797 869 aa15.05■□□□□ -0
CCL2-201ENST00000225831 ZNF692Q9BU19 519 aaPredicted RBP15.04■□□□□ -0
CCL2-201ENST00000225831 CD44P16070 742 aaKnown RBP14.99□□□□□ -0.01
CCL2-201ENST00000225831 PRR29P0C7W0 189 aa14.97□□□□□ -0.01
CCL2-201ENST00000225831 DCBLD2Q96PD2 775 aa14.91□□□□□ -0.02
CCL2-201ENST00000225831 FARP1Q9Y4F1 1045 aaPredicted RBP14.87□□□□□ -0.03
CCL2-201ENST00000225831 OTUD5Q96G74 571 aa14.85□□□□□ -0.03
CCL2-201ENST00000225831 POTEMA6NI47 508 aa14.82□□□□□ -0.04
CCL2-201ENST00000225831 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
CCL2-201ENST00000225831 ZNF579Q8NAF0 562 aaKnown RBP14.77□□□□□ -0.05
CCL2-201ENST00000225831 POTEGQ6S5H5 508 aa14.74□□□□□ -0.05
CCL2-201ENST00000225831 POTEB2H3BUK9 544 aa14.72□□□□□ -0.05
CCL2-201ENST00000225831 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
CCL2-201ENST00000225831 PCDH10Q9P2E7 1040 aa14.68□□□□□ -0.06
CCL2-201ENST00000225831 GALR2O43603 387 aaPredicted RBP14.62□□□□□ -0.07
CCL2-201ENST00000225831 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
CCL2-201ENST00000225831 SPDYE4A6NLX3 237 aa14.6□□□□□ -0.07
CCL2-201ENST00000225831 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
CCL2-201ENST00000225831 CREBZFQ9NS37 354 aa14.42□□□□□ -0.1
CCL2-201ENST00000225831 LCE2DQ5TA82 110 aaPredicted RBP14.4□□□□□ -0.1
CCL2-201ENST00000225831 ABCC9O60706 1549 aa14.4□□□□□ -0.1
CCL2-201ENST00000225831 POTEJP0CG39 1038 aa14.36□□□□□ -0.11
CCL2-201ENST00000225831 PHF12Q96QT6 1004 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms