RNA–Protein interactions for RNA: ENST00000506270.1

SSX8-201, Transcript of Protein SSX8, humanhuman

BASIC

Gene SSX8, Length 579 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8-201ENST00000506270 AEBP2Q6ZN18 517 aaPredicted RBP17.53■□□□□ 0.4
SSX8-201ENST00000506270 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
SSX8-201ENST00000506270 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
SSX8-201ENST00000506270 NISCHQ9Y2I1 1504 aa15.04■□□□□ -0
SSX8-201ENST00000506270 POTEDQ86YR6 584 aa14.9□□□□□ -0.02
SSX8-201ENST00000506270 PHF23Q9BUL5 403 aaPredicted RBP14.8□□□□□ -0.04
SSX8-201ENST00000506270 FOXD1Q16676 465 aa14.21□□□□□ -0.13
SSX8-201ENST00000506270 MSH5O43196 834 aa13.68□□□□□ -0.22
SSX8-201ENST00000506270 PIAS4Q8N2W9 510 aaPredicted RBP13.06□□□□□ -0.32
SSX8-201ENST00000506270 CCDC180Q9P1Z9 1646 aa12.9□□□□□ -0.34
SSX8-201ENST00000506270 ZCCHC6Q5VYS8 1495 aaKnown RBP12.79□□□□□ -0.36
SSX8-201ENST00000506270 SHROOM4Q9ULL8 1493 aa12.68□□□□□ -0.38
SSX8-201ENST00000506270 PPP6R1Q9UPN7 881 aa12.55□□□□□ -0.4
SSX8-201ENST00000506270 SUPT5HO00267 1087 aaKnown RBP12.5□□□□□ -0.41
SSX8-201ENST00000506270 DCAF1Q9Y4B6 1507 aa12.47□□□□□ -0.41
SSX8-201ENST00000506270 ADRA2BP18089 450 aa12.46□□□□□ -0.41
SSX8-201ENST00000506270 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
SSX8-201ENST00000506270 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
SSX8-201ENST00000506270 HRCP23327 699 aa12.26□□□□□ -0.45
SSX8-201ENST00000506270 PLPPR3Q6T4P5 718 aa12.2□□□□□ -0.46
SSX8-201ENST00000506270 ABCC9O60706 1549 aa12.14□□□□□ -0.47
SSX8-201ENST00000506270 DCAF8L2P0C7V8 631 aa12.12□□□□□ -0.47
SSX8-201ENST00000506270 PCGF6Q9BYE7 350 aa12.02□□□□□ -0.49
SSX8-201ENST00000506270 RB1CC1Q8TDY2 1594 aa11.91□□□□□ -0.5
SSX8-201ENST00000506270 SCRIBQ14160 1630 aa11.9□□□□□ -0.5
SSX8-201ENST00000506270 TRIM26Q12899 539 aaPredicted RBP11.9□□□□□ -0.5
SSX8-201ENST00000506270 RSF1Q96T23 1441 aaPredicted RBP11.89□□□□□ -0.51
SSX8-201ENST00000506270 DMRT2Q9Y5R5 561 aa11.86□□□□□ -0.51
SSX8-201ENST00000506270 ZEB1P37275 1124 aaPredicted RBP11.84□□□□□ -0.51
SSX8-201ENST00000506270 LOC105371045A0A1W2PR82 267 aa11.82□□□□□ -0.52
SSX8-201ENST00000506270 NACADO15069 1562 aa11.82□□□□□ -0.52
SSX8-201ENST00000506270 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
SSX8-201ENST00000506270 TRIM41Q8WV44 630 aa11.73□□□□□ -0.53
SSX8-201ENST00000506270 MAPK8IP2Q13387 824 aaPredicted RBP11.72□□□□□ -0.53
SSX8-201ENST00000506270 BAZ1AQ9NRL2 1556 aaPredicted RBP11.67□□□□□ -0.54
SSX8-201ENST00000506270 MROH2BQ7Z745 1585 aa11.63□□□□□ -0.55
SSX8-201ENST00000506270 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
SSX8-201ENST00000506270 WIZO95785 1651 aa11.6□□□□□ -0.55
SSX8-201ENST00000506270 CECR2Q9BXF3 1484 aa11.59□□□□□ -0.55
SSX8-201ENST00000506270 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
SSX8-201ENST00000506270 PELP1Q8IZL8 1130 aaKnown RBP11.55□□□□□ -0.56
SSX8-201ENST00000506270 TOP2AP11388 1531 aaKnown RBP11.53□□□□□ -0.56
SSX8-201ENST00000506270 FAM9AQ8IZU1 332 aaPredicted RBP11.51□□□□□ -0.57
SSX8-201ENST00000506270 POTEHQ6S545 545 aa11.5□□□□□ -0.57
SSX8-201ENST00000506270 SMARCA4P51532 1647 aa11.46□□□□□ -0.57
SSX8-201ENST00000506270 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
SSX8-201ENST00000506270 SCAF1Q9H7N4 1312 aaKnown RBP11.46□□□□□ -0.57
SSX8-201ENST00000506270 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.57
SSX8-201ENST00000506270 EEA1Q15075 1411 aa11.44□□□□□ -0.58
SSX8-201ENST00000506270 DCAF8L1A6NGE4 600 aa11.42□□□□□ -0.58
SSX8-201ENST00000506270 SMARCA2P51531 1590 aa11.41□□□□□ -0.58
SSX8-201ENST00000506270 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
SSX8-201ENST00000506270 UNC13AQ9UPW8 1703 aa11.36□□□□□ -0.59
SSX8-201ENST00000506270 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
SSX8-201ENST00000506270 TNIKQ9UKE5 1360 aa11.35□□□□□ -0.59
SSX8-201ENST00000506270 ABCC8Q09428 1581 aa11.34□□□□□ -0.59
SSX8-201ENST00000506270 CEP162Q5TB80 1403 aa11.34□□□□□ -0.59
SSX8-201ENST00000506270 CCER1Q8TC90 406 aaPredicted RBP11.32□□□□□ -0.6
SSX8-201ENST00000506270 GOLGA3Q08378 1498 aa11.31□□□□□ -0.6
SSX8-201ENST00000506270 PEG3Q9GZU2 1588 aa11.28□□□□□ -0.6
SSX8-201ENST00000506270 KIF21BO75037 1637 aa11.27□□□□□ -0.61
SSX8-201ENST00000506270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.24□□□□□ -0.61
SSX8-201ENST00000506270 CENPBP07199 599 aaPredicted RBP11.24□□□□□ -0.61
SSX8-201ENST00000506270 ACIN1Q9UKV3 1341 aaKnown RBP11.24□□□□□ -0.61
SSX8-201ENST00000506270 SOGA1O94964 1423 aa11.23□□□□□ -0.61
SSX8-201ENST00000506270 CEP164Q9UPV0 1460 aa11.22□□□□□ -0.61
SSX8-201ENST00000506270 SLC24A1O60721 1099 aa11.21□□□□□ -0.61
SSX8-201ENST00000506270 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.61
SSX8-201ENST00000506270 KCNA4P22459 653 aa11.2□□□□□ -0.62
SSX8-201ENST00000506270 DIEXFQ68CQ4 756 aaKnown RBP11.2□□□□□ -0.62
SSX8-201ENST00000506270 BAZ1BQ9UIG0 1483 aaKnown RBP11.19□□□□□ -0.62
SSX8-201ENST00000506270 BICRAQ9NZM4 1560 aa11.17□□□□□ -0.62
SSX8-201ENST00000506270 SYNJ1O43426 1573 aa11.15□□□□□ -0.62
SSX8-201ENST00000506270 RUSC2Q8N2Y8 1516 aa11.14□□□□□ -0.63
SSX8-201ENST00000506270 UBTFP17480 764 aaKnown RBP11.14□□□□□ -0.63
SSX8-201ENST00000506270 VPS8Q8N3P4 1428 aa11.12□□□□□ -0.63
SSX8-201ENST00000506270 ZNF316A6NFI3 1004 aaPredicted RBP11.11□□□□□ -0.63
SSX8-201ENST00000506270 NEUROD1Q13562 356 aa11.11□□□□□ -0.63
SSX8-201ENST00000506270 CLIP1P30622 1438 aa11.1□□□□□ -0.63
SSX8-201ENST00000506270 MYT1Q01538 1121 aa11.09□□□□□ -0.63
SSX8-201ENST00000506270 BIVM-ERCC5R4GMW8 1640 aa11.07□□□□□ -0.64
SSX8-201ENST00000506270 ATAD2BQ9ULI0 1458 aa11.06□□□□□ -0.64
SSX8-201ENST00000506270 TOP2BQ02880 1626 aa11.06□□□□□ -0.64
SSX8-201ENST00000506270 ERICH3Q5RHP9 1530 aa11.06□□□□□ -0.64
SSX8-201ENST00000506270 HOXD11P31277 338 aaPredicted RBP11.06□□□□□ -0.64
SSX8-201ENST00000506270 GTF3C3Q9Y5Q9 886 aa11.04□□□□□ -0.64
SSX8-201ENST00000506270 TTBK1Q5TCY1 1321 aaPredicted RBP11.03□□□□□ -0.64
SSX8-201ENST00000506270 APLP2Q06481 763 aa11.01□□□□□ -0.65
SSX8-201ENST00000506270 CLSPNQ9HAW4 1339 aa11.01□□□□□ -0.65
SSX8-201ENST00000506270 RAPGEF2Q9Y4G8 1499 aa11□□□□□ -0.65
SSX8-201ENST00000506270 HMGXB3Q12766 1538 aa10.95□□□□□ -0.66
SSX8-201ENST00000506270 PRXQ9BXM0 1461 aa10.94□□□□□ -0.66
SSX8-201ENST00000506270 HNRNPUL2Q1KMD3 747 aaKnown RBP10.93□□□□□ -0.66
SSX8-201ENST00000506270 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
SSX8-201ENST00000506270 ARAP1Q96P48 1450 aa10.93□□□□□ -0.66
SSX8-201ENST00000506270 PRDM2Q13029 1718 aa10.9□□□□□ -0.66
SSX8-201ENST00000506270 CUX2O14529 1486 aa10.9□□□□□ -0.66
SSX8-201ENST00000506270 RRBP1Q9P2E9 1410 aaKnown RBP10.89□□□□□ -0.67
SSX8-201ENST00000506270 DNAJC5BQ9UF47 199 aa10.88□□□□□ -0.67
SSX8-201ENST00000506270 KIF27Q86VH2 1401 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms