Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 RASSF5-208ENST00000605653 575 ntTSL 511.39□□□□□ -0.593e-8■□□□□ 10
PRPF8Q6P2Q9 RNH1-211ENST00000526295 488 ntTSL 310.11□□□□□ -0.793e-8■□□□□ 10
PRPF8Q6P2Q9 RASSF5-206ENST00000581888 4499 ntTSL 28.86□□□□□ -0.993e-8■□□□□ 10
PRPF8Q6P2Q9 RASSF5-203ENST00000579942 3279 ntTSL 26.88□□□□□ -1.313e-8■□□□□ 10
PRPF8Q6P2Q9 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC6.7□□□□□ -1.343e-8■□□□□ 10
PRPF8Q6P2Q9 RNH1-220ENST00000531540 480 ntTSL 25.43□□□□□ -1.543e-8■□□□□ 10
PRPF8Q6P2Q9 CFB-281ENST00000482886 481 ntTSL 25.74□□□□□ -1.497e-31■□□□□ 10
PRPF8Q6P2Q9 COL18A1-207ENST00000473212 2515 ntTSL 216.08■□□□□ 0.171e-15■□□□□ 10
PRPF8Q6P2Q9 TSC2-218ENST00000562474 589 ntTSL 59.54□□□□□ -0.882e-6■□□□□ 10
PRPF8Q6P2Q9 HDGFL2-204ENST00000592691 740 ntTSL 214.16□□□□□ -0.143e-8■□□□□ 10
PRPF8Q6P2Q9 MCEE-202ENST00000413592 523 ntTSL 2-1.21□□□□□ -2.63e-7■□□□□ 10
PRPF8Q6P2Q9 MTA3-209ENST00000454356 1702 ntTSL 523.4■■□□□ 1.349e-7■□□□□ 10
PRPF8Q6P2Q9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC10.99□□□□□ -0.659e-7■□□□□ 10
PRPF8Q6P2Q9 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.01□□□□□ -0.819e-7■□□□□ 10
PRPF8Q6P2Q9 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.849e-7■□□□□ 10
PRPF8Q6P2Q9 MTA3-210ENST00000461256 553 ntTSL 59.81□□□□□ -0.849e-7■□□□□ 10
PRPF8Q6P2Q9 MTA3-216ENST00000484780 563 ntTSL 48.99□□□□□ -0.979e-7■□□□□ 10
PRPF8Q6P2Q9 MTA3-206ENST00000409019 2525 ntTSL 57.4□□□□□ -1.229e-7■□□□□ 10
PRPF8Q6P2Q9 MTA3-207ENST00000430763 758 ntTSL 57.19□□□□□ -1.269e-7■□□□□ 10
PRPF8Q6P2Q9 MTA3-205ENST00000407270 2202 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.379e-7■□□□□ 10
PRPF8Q6P2Q9 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.26□□□□□ -1.419e-7■□□□□ 10
PRPF8Q6P2Q9 MIIP-206ENST00000492256 806 ntTSL 212.57□□□□□ -0.45e-9■□□□□ 10
PRPF8Q6P2Q9 SLTM-205ENST00000474342 505 ntTSL 23.25□□□□□ -1.895e-9■□□□□ 10
PRPF8Q6P2Q9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.08□□□□□ -1.925e-9■□□□□ 10
PRPF8Q6P2Q9 MYH9-206ENST00000472210 387 ntTSL 313.54□□□□□ -0.243e-10■□□□□ 10
PRPF8Q6P2Q9 ZNF385A-215ENST00000552382 1516 ntTSL 317.35■□□□□ 0.373e-9■□□□□ 10
PRPF8Q6P2Q9 ZNF385A-211ENST00000550779 2099 ntTSL 513.89□□□□□ -0.193e-9■□□□□ 10
PRPF8Q6P2Q9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.18□□□□□ -0.33e-9■□□□□ 10
PRPF8Q6P2Q9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.85□□□□□ -0.353e-9■□□□□ 10
PRPF8Q6P2Q9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.68□□□□□ -0.383e-9■□□□□ 10
PRPF8Q6P2Q9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.14□□□□□ -0.633e-9■□□□□ 10
PRPF8Q6P2Q9 ZNF385A-206ENST00000547210 568 ntTSL 411.08□□□□□ -0.643e-9■□□□□ 10
PRPF8Q6P2Q9 ZNF385A-209ENST00000550120 477 ntTSL 410.42□□□□□ -0.743e-9■□□□□ 10
PRPF8Q6P2Q9 ZNF385A-204ENST00000546919 775 ntTSL 59.86□□□□□ -0.833e-9■□□□□ 10
PRPF8Q6P2Q9 ZNF385A-207ENST00000549937 761 ntTSL 59.57□□□□□ -0.883e-9■□□□□ 10
PRPF8Q6P2Q9 ZNF385A-214ENST00000551864 542 ntTSL 58.79□□□□□ -13e-9■□□□□ 10
PRPF8Q6P2Q9 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC7.75□□□□□ -1.173e-17■□□□□ 10
PRPF8Q6P2Q9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.31e-17■□□□□ 10
PRPF8Q6P2Q9 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)13.12□□□□□ -0.311e-17■□□□□ 10
PRPF8Q6P2Q9 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)12.73□□□□□ -0.371e-17■□□□□ 10
PRPF8Q6P2Q9 CBFA2T3-205ENST00000563856 2380 ntTSL 213.51□□□□□ -0.255e-7■□□□□ 10
PRPF8Q6P2Q9 TAL1-204ENST00000464796 237 ntTSL 1 (best)7.63□□□□□ -1.192e-6■□□□□ 10
PRPF8Q6P2Q9 RNU6-2-201ENST00000384627 107 ntBASIC1.79□□□□□ -2.123e-44■□□□□ 10
PRPF8Q6P2Q9 MIR17-201ENST00000385012 84 ntBASIC1.07□□□□□ -2.242e-15■□□□□ 10
PRPF8Q6P2Q9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.077e-8■□□□□ 10
PRPF8Q6P2Q9 AZGP1-203ENST00000419575 719 ntTSL 311.74□□□□□ -0.532e-15■□□□□ 10
PRPF8Q6P2Q9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.6□□□□□ -0.552e-15■□□□□ 10
PRPF8Q6P2Q9 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.712e-15■□□□□ 10
PRPF8Q6P2Q9 AZGP1-206ENST00000495765 540 ntTSL 25.69□□□□□ -1.52e-15■□□□□ 10
PRPF8Q6P2Q9 KIF1C-203ENST00000573815 726 ntTSL 58.42□□□□□ -1.061e-6■□□□□ 10
PRPF8Q6P2Q9 ATP2A2-212ENST00000553144 264 ntTSL 1 (best)3.44□□□□□ -1.861e-18■□□□□ 10
PRPF8Q6P2Q9 IL4I1-208ENST00000601717 2261 ntTSL 1 (best)14.48□□□□□ -0.096e-8■□□□□ 10
PRPF8Q6P2Q9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.116e-8■□□□□ 10
PRPF8Q6P2Q9 IL4I1-206ENST00000596022 747 ntTSL 214.31□□□□□ -0.126e-8■□□□□ 10
PRPF8Q6P2Q9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.296e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-204ENST00000594673 564 ntTSL 513.15□□□□□ -0.36e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-206ENST00000595463 563 ntTSL 413.08□□□□□ -0.326e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.326e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-219ENST00000599830 588 ntTSL 412.86□□□□□ -0.356e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-214ENST00000598301 565 ntTSL 412.77□□□□□ -0.376e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-215ENST00000599186 466 ntTSL 512.77□□□□□ -0.376e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.51□□□□□ -0.576e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-220ENST00000600583 782 ntTSL 411.25□□□□□ -0.616e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-216ENST00000599560 562 ntTSL 211.24□□□□□ -0.616e-8■□□□□ 10
PRPF8Q6P2Q9 IL4I1-207ENST00000597295 651 ntTSL 311.19□□□□□ -0.626e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-223ENST00000601665 531 ntTSL 511.16□□□□□ -0.626e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-209ENST00000596437 894 ntTSL 410.36□□□□□ -0.756e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.786e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-222ENST00000600935 587 ntTSL 410.11□□□□□ -0.796e-8■□□□□ 10
PRPF8Q6P2Q9 IL4I1-205ENST00000596011 714 ntTSL 29.53□□□□□ -0.886e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.96e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-218ENST00000599788 564 ntTSL 49.15□□□□□ -0.946e-8■□□□□ 10
PRPF8Q6P2Q9 AC011452.1-201ENST00000451973 575 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.996e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-217ENST00000599567 579 ntTSL 48.61□□□□□ -1.036e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.076e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-213ENST00000597814 510 ntTSL 47.93□□□□□ -1.146e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-203ENST00000593652 905 ntTSL 27.8□□□□□ -1.166e-8■□□□□ 10
PRPF8Q6P2Q9 NUP62-210ENST00000596680 473 ntTSL 26.12□□□□□ -1.436e-8■□□□□ 10
PRPF8Q6P2Q9 PABPC1-207ENST00000518716 694 ntTSL 25.57□□□□□ -1.526e-17■□□□□ 10
PRPF8Q6P2Q9 ERLEC1-204ENST00000494373 485 ntTSL 317.14■□□□□ 0.334e-6■□□□□ 10
PRPF8Q6P2Q9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.5■□□□□ 0.234e-6■□□□□ 10
PRPF8Q6P2Q9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.074e-6■□□□□ 10
PRPF8Q6P2Q9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.274e-6■□□□□ 10
PRPF8Q6P2Q9 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.72e-6■□□□□ 10
PRPF8Q6P2Q9 BRF1-208ENST00000546997 1999 ntTSL 213.28□□□□□ -0.283e-6■□□□□ 10
PRPF8Q6P2Q9 FAM234A-215ENST00000468354 462 ntTSL 312.28□□□□□ -0.443e-6■□□□□ 10
PRPF8Q6P2Q9 DMXL1-211ENST00000512281 811 ntTSL 3-0.03□□□□□ -2.416e-12■□□□□ 10
PRPF8Q6P2Q9 PABPC4-207ENST00000451091 898 ntTSL 319.47■□□□□ 0.716e-17■□□□□ 10
PRPF8Q6P2Q9 USB1-211ENST00000565662 719 ntTSL 414.35□□□□□ -0.113e-7■□□□□ 10
PRPF8Q6P2Q9 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.31□□□□□ -0.283e-7■□□□□ 10
PRPF8Q6P2Q9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.343e-7■□□□□ 10
PRPF8Q6P2Q9 USB1-205ENST00000561743 1135 ntTSL 3 BASIC11.65□□□□□ -0.543e-7■□□□□ 10
PRPF8Q6P2Q9 MSH6-202ENST00000411819 548 ntTSL 419.25■□□□□ 0.675e-7■□□□□ 10
PRPF8Q6P2Q9 MSH6-206ENST00000455383 578 ntTSL 516.39■□□□□ 0.215e-7■□□□□ 10
PRPF8Q6P2Q9 MSH6-207ENST00000456246 846 ntTSL 315.35■□□□□ 0.055e-7■□□□□ 10
PRPF8Q6P2Q9 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC10.29□□□□□ -0.765e-7■□□□□ 10
PRPF8Q6P2Q9 ARRDC1-208ENST00000475658 854 ntTSL 318.11■□□□□ 0.499e-7■□□□□ 10
PRPF8Q6P2Q9 ACVR2B-203ENST00000465020 1666 ntTSL 214.41□□□□□ -0.12e-6■□□□□ 10
PRPF8Q6P2Q9 ATP6V1G1-202ENST00000473413 470 ntTSL 212.9□□□□□ -0.342e-6■□□□□ 10
PRPF8Q6P2Q9 ACVR2B-202ENST00000461232 5370 ntTSL 1 (best)10.14□□□□□ -0.792e-6■□□□□ 10
Retrieved 100 of 73,762 protein–RNA pairs in 570.8 ms