RNA–Protein interactions for RNA: ENST00000563856.1

CBFA2T3-205, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 2,380 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-205ENST00000563856 NISCHQ9Y2I1 1504 aa38.63■■■■□ 3.77
CBFA2T3-205ENST00000563856 CCDC180Q9P1Z9 1646 aa33.92■■■■□ 3.02
CBFA2T3-205ENST00000563856 ZCCHC6Q5VYS8 1495 aaKnown RBP32.41■■■□□ 2.78
CBFA2T3-205ENST00000563856 ABCC9O60706 1549 aa32.18■■■□□ 2.74
CBFA2T3-205ENST00000563856 DCAF1Q9Y4B6 1507 aa32.01■■■□□ 2.71
CBFA2T3-205ENST00000563856 DCAF8L2P0C7V8 631 aa31.78■■■□□ 2.68
CBFA2T3-205ENST00000563856 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.68
CBFA2T3-205ENST00000563856 NACADO15069 1562 aa31.62■■■□□ 2.65
CBFA2T3-205ENST00000563856 HRCP23327 699 aa31.46■■■□□ 2.63
CBFA2T3-205ENST00000563856 RB1CC1Q8TDY2 1594 aa31.4■■■□□ 2.62
CBFA2T3-205ENST00000563856 SHROOM4Q9ULL8 1493 aa31.12■■■□□ 2.57
CBFA2T3-205ENST00000563856 SCRIBQ14160 1630 aa31.04■■■□□ 2.56
CBFA2T3-205ENST00000563856 UNC13AQ9UPW8 1703 aa30.8■■■□□ 2.52
CBFA2T3-205ENST00000563856 PELP1Q8IZL8 1130 aaKnown RBP30.79■■■□□ 2.52
CBFA2T3-205ENST00000563856 SUPT5HO00267 1087 aaKnown RBP30.6■■■□□ 2.49
CBFA2T3-205ENST00000563856 PCGF6Q9BYE7 350 aa30.58■■■□□ 2.49
CBFA2T3-205ENST00000563856 PPARGC1BQ86YN6 1023 aaKnown RBP30.49■■■□□ 2.47
CBFA2T3-205ENST00000563856 BICRAQ9NZM4 1560 aa30.46■■■□□ 2.47
CBFA2T3-205ENST00000563856 CHIC1Q5VXU3 224 aa30.33■■■□□ 2.45
CBFA2T3-205ENST00000563856 PABPN1Q86U42 306 aaKnown RBP eCLIP30.22■■■□□ 2.43
CBFA2T3-205ENST00000563856 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
CBFA2T3-205ENST00000563856 BAZ1AQ9NRL2 1556 aaPredicted RBP29.86■■■□□ 2.37
CBFA2T3-205ENST00000563856 RSF1Q96T23 1441 aaPredicted RBP29.81■■■□□ 2.36
CBFA2T3-205ENST00000563856 TRIM26Q12899 539 aaPredicted RBP29.8■■■□□ 2.36
CBFA2T3-205ENST00000563856 MROH2BQ7Z745 1585 aa29.8■■■□□ 2.36
CBFA2T3-205ENST00000563856 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
CBFA2T3-205ENST00000563856 ZEB1P37275 1124 aaPredicted RBP29.77■■■□□ 2.36
CBFA2T3-205ENST00000563856 MYT1Q01538 1121 aa29.74■■■□□ 2.35
CBFA2T3-205ENST00000563856 SCAF1Q9H7N4 1312 aaKnown RBP29.69■■■□□ 2.34
CBFA2T3-205ENST00000563856 WIZO95785 1651 aa29.55■■■□□ 2.32
CBFA2T3-205ENST00000563856 EIF4G1Q04637 1599 aaKnown RBP29.55■■■□□ 2.32
CBFA2T3-205ENST00000563856 PEG3Q9GZU2 1588 aa29.47■■■□□ 2.31
CBFA2T3-205ENST00000563856 LOC105371045A0A1W2PR82 267 aa29.42■■■□□ 2.3
CBFA2T3-205ENST00000563856 SMARCA2P51531 1590 aa29.34■■■□□ 2.29
CBFA2T3-205ENST00000563856 ATAD2BQ9ULI0 1458 aa29.33■■■□□ 2.29
CBFA2T3-205ENST00000563856 TOP2AP11388 1531 aaKnown RBP29.28■■■□□ 2.28
CBFA2T3-205ENST00000563856 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
CBFA2T3-205ENST00000563856 NCAPD3P42695 1498 aa29.15■■■□□ 2.26
CBFA2T3-205ENST00000563856 BAZ1BQ9UIG0 1483 aaKnown RBP29.14■■■□□ 2.26
CBFA2T3-205ENST00000563856 HMGXB3Q12766 1538 aa29.12■■■□□ 2.25
CBFA2T3-205ENST00000563856 ACIN1Q9UKV3 1341 aaKnown RBP29.06■■■□□ 2.24
CBFA2T3-205ENST00000563856 CCDC88BA6NC98 1476 aa28.92■■■□□ 2.22
CBFA2T3-205ENST00000563856 NEUROD1Q13562 356 aa28.83■■■□□ 2.21
CBFA2T3-205ENST00000563856 CENPBP07199 599 aaPredicted RBP28.8■■■□□ 2.2
CBFA2T3-205ENST00000563856 GTF3C3Q9Y5Q9 886 aa28.72■■■□□ 2.19
CBFA2T3-205ENST00000563856 DNAJC5BQ9UF47 199 aa28.61■■■□□ 2.17
CBFA2T3-205ENST00000563856 DIEXFQ68CQ4 756 aaKnown RBP28.47■■■□□ 2.15
CBFA2T3-205ENST00000563856 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
CBFA2T3-205ENST00000563856 CFTRP13569 1480 aa28.41■■■□□ 2.14
CBFA2T3-205ENST00000563856 CCER1Q8TC90 406 aaPredicted RBP28.37■■■□□ 2.13
CBFA2T3-205ENST00000563856 PRDM2Q13029 1718 aa28.36■■■□□ 2.13
CBFA2T3-205ENST00000563856 CADPSQ9ULU8 1353 aa28.34■■■□□ 2.13
CBFA2T3-205ENST00000563856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.28■■■□□ 2.12
CBFA2T3-205ENST00000563856 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
CBFA2T3-205ENST00000563856 FAM9AQ8IZU1 332 aaPredicted RBP28.22■■■□□ 2.11
CBFA2T3-205ENST00000563856 ABCC8Q09428 1581 aa28.2■■■□□ 2.1
CBFA2T3-205ENST00000563856 NESP48681 1621 aa28.17■■■□□ 2.1
CBFA2T3-205ENST00000563856 WRNQ14191 1432 aaPredicted RBP eCLIP28.07■■■□□ 2.08
CBFA2T3-205ENST00000563856 FANCD2Q9BXW9 1451 aa28.03■■■□□ 2.08
CBFA2T3-205ENST00000563856 SYNJ1O43426 1573 aa28■■■□□ 2.07
CBFA2T3-205ENST00000563856 PDS5BQ9NTI5 1447 aa27.97■■■□□ 2.07
CBFA2T3-205ENST00000563856 ZNF316A6NFI3 1004 aaPredicted RBP27.96■■■□□ 2.07
CBFA2T3-205ENST00000563856 TTBK1Q5TCY1 1321 aaPredicted RBP27.95■■■□□ 2.07
CBFA2T3-205ENST00000563856 BIVM-ERCC5R4GMW8 1640 aa27.94■■■□□ 2.06
CBFA2T3-205ENST00000563856 TOP2BQ02880 1626 aa27.93■■■□□ 2.06
CBFA2T3-205ENST00000563856 EHMT2Q96KQ7 1210 aa27.91■■■□□ 2.06
CBFA2T3-205ENST00000563856 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
CBFA2T3-205ENST00000563856 CUX1P39880 1505 aa27.9■■■□□ 2.06
CBFA2T3-205ENST00000563856 CEP164Q9UPV0 1460 aa27.9■■■□□ 2.06
CBFA2T3-205ENST00000563856 YTHDC1Q96MU7 727 aaKnown RBP27.82■■■□□ 2.04
CBFA2T3-205ENST00000563856 DNMBPQ6XZF7 1577 aa27.78■■■□□ 2.04
CBFA2T3-205ENST00000563856 CLSPNQ9HAW4 1339 aa27.73■■■□□ 2.03
CBFA2T3-205ENST00000563856 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
CBFA2T3-205ENST00000563856 URB2Q14146 1524 aaKnown RBP27.71■■■□□ 2.03
CBFA2T3-205ENST00000563856 MRC2Q9UBG0 1479 aa27.65■■■□□ 2.02
CBFA2T3-205ENST00000563856 MIER1Q8N108 512 aa27.64■■■□□ 2.02
CBFA2T3-205ENST00000563856 ERCC6Q03468 1493 aa27.63■■■□□ 2.01
CBFA2T3-205ENST00000563856 FGD5Q6ZNL6 1462 aa27.63■■■□□ 2.01
CBFA2T3-205ENST00000563856 SOGA1O94964 1423 aa27.58■■■□□ 2.01
CBFA2T3-205ENST00000563856 POLA1P09884 1462 aaPredicted RBP27.55■■■□□ 2
CBFA2T3-205ENST00000563856 WDR62O43379 1518 aa27.55■■■□□ 2
CBFA2T3-205ENST00000563856 THOC2Q8NI27 1593 aaKnown RBP27.55■■■□□ 2
CBFA2T3-205ENST00000563856 EEA1Q15075 1411 aa27.54■■■□□ 2
CBFA2T3-205ENST00000563856 RUSC2Q8N2Y8 1516 aa27.5■■□□□ 1.99
CBFA2T3-205ENST00000563856 ANP32EQ9BTT0 268 aa27.48■■□□□ 1.99
CBFA2T3-205ENST00000563856 CEP162Q5TB80 1403 aa27.44■■□□□ 1.98
CBFA2T3-205ENST00000563856 WDR97A6NE52 1622 aa27.41■■□□□ 1.98
CBFA2T3-205ENST00000563856 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
CBFA2T3-205ENST00000563856 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
CBFA2T3-205ENST00000563856 BCL11AQ9H165 835 aa27.4■■□□□ 1.98
CBFA2T3-205ENST00000563856 KIF27Q86VH2 1401 aa27.38■■□□□ 1.97
CBFA2T3-205ENST00000563856 SUPT16HQ9Y5B9 1047 aaKnown RBP27.38■■□□□ 1.97
CBFA2T3-205ENST00000563856 CUX2O14529 1486 aa27.37■■□□□ 1.97
CBFA2T3-205ENST00000563856 TARBP1Q13395 1621 aaKnown RBP27.36■■□□□ 1.97
CBFA2T3-205ENST00000563856 CSRNP3Q8WYN3 585 aa27.33■■□□□ 1.97
CBFA2T3-205ENST00000563856 TNIKQ9UKE5 1360 aa27.32■■□□□ 1.96
CBFA2T3-205ENST00000563856 TSHZ2Q9NRE2 1034 aa27.27■■□□□ 1.96
CBFA2T3-205ENST00000563856 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
CBFA2T3-205ENST00000563856 ABCA5Q8WWZ7 1642 aa27.25■■□□□ 1.95
CBFA2T3-205ENST00000563856 KIF21BO75037 1637 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms