Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 OR51B8P-201ENST00000449892 769 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 RPL21P92-201ENST00000454107 476 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 CDC42P1-201ENST00000456658 548 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 RPS3AP17-201ENST00000472594 777 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC069439.1-201ENST00000494739 167 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 RN7SKP298-201ENST00000515950 94 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 CCAR2-208ENST00000521301 337 ntTSL 3 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AP002004.1-206ENST00000532441 876 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC016954.1-201ENST00000549976 745 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 MIR5008-201ENST00000584300 94 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 RPL10P15-201ENST00000585756 315 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC015871.2-201ENST00000603605 948 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 MIR1302-2-201ENST00000607096 138 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC023983.2-201ENST00000608010 562 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC002550.2-201ENST00000621246 394 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC079684.1-201ENST00000621405 437 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 RPL4P3-201ENST00000428881 1311 ntBASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCUBE3Q8IX30 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC108463.3-201ENST00000603748 1482 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 SLC16A1P1-201ENST00000486743 1510 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 RN7SKP239-201ENST00000364814 295 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 Y_RNA.453-201ENST00000384223 109 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 RPL5P20-201ENST00000403848 896 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC002367.1-201ENST00000416765 405 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC092066.1-201ENST00000425131 317 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC016908.1-201ENST00000442571 1219 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 GDI2P2-201ENST00000445131 608 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC146507.1-201ENST00000468335 354 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 RPL9P6-201ENST00000492764 598 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 RPL4P1-201ENST00000496596 1278 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC114786.3-201ENST00000509304 705 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 TCEA1-204ENST00000518784 586 ntTSL 2 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 HNRNPA1P38-201ENST00000523612 957 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 MRVI1-AS1-201ENST00000525578 829 ntTSL 3 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC079031.2-201ENST00000537742 615 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC174071.1-201ENST00000603069 517 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AL392112.1-201ENST00000605115 829 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC012557.1-201ENST00000607115 611 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC012360.2-201ENST00000609349 391 ntBASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 ZSCAN26-203ENST00000611552 1030 ntTSL 2 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 GSPT1-206ENST00000563468 1962 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SCUBE3Q8IX30 ASB8-205ENST00000536549 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms