RNA–Protein interactions for RNA: ENST00000616579.4

TMPRSS4-219, Transcript of transmembrane serine protease 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMPRSS4, Length 3,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-219ENST00000616579 NISCHQ9Y2I1 1504 aa17.19■□□□□ 0.34
TMPRSS4-219ENST00000616579 DCAF8L2P0C7V8 631 aa15.31■□□□□ 0.04
TMPRSS4-219ENST00000616579 SHROOM4Q9ULL8 1493 aa15.12■□□□□ 0.01
TMPRSS4-219ENST00000616579 SUPT5HO00267 1087 aaKnown RBP14.94□□□□□ -0.02
TMPRSS4-219ENST00000616579 ZCCHC6Q5VYS8 1495 aaKnown RBP14.49□□□□□ -0.09
TMPRSS4-219ENST00000616579 CCDC180Q9P1Z9 1646 aa14.4□□□□□ -0.1
TMPRSS4-219ENST00000616579 CHIC1Q5VXU3 224 aa14.32□□□□□ -0.12
TMPRSS4-219ENST00000616579 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
TMPRSS4-219ENST00000616579 PCGF6Q9BYE7 350 aa14.13□□□□□ -0.15
TMPRSS4-219ENST00000616579 MYO15BQ96JP2 1530 aa14.08□□□□□ -0.15
TMPRSS4-219ENST00000616579 LOC105371045A0A1W2PR82 267 aa14.01□□□□□ -0.17
TMPRSS4-219ENST00000616579 HRCP23327 699 aa14□□□□□ -0.17
TMPRSS4-219ENST00000616579 ABCC9O60706 1549 aa13.97□□□□□ -0.17
TMPRSS4-219ENST00000616579 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
TMPRSS4-219ENST00000616579 FAM9AQ8IZU1 332 aaPredicted RBP13.87□□□□□ -0.19
TMPRSS4-219ENST00000616579 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
TMPRSS4-219ENST00000616579 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
TMPRSS4-219ENST00000616579 SCRIBQ14160 1630 aa13.77□□□□□ -0.2
TMPRSS4-219ENST00000616579 TRIM26Q12899 539 aaPredicted RBP13.74□□□□□ -0.21
TMPRSS4-219ENST00000616579 RSF1Q96T23 1441 aaPredicted RBP13.69□□□□□ -0.22
TMPRSS4-219ENST00000616579 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
TMPRSS4-219ENST00000616579 TTBK1Q5TCY1 1321 aaPredicted RBP13.58□□□□□ -0.23
TMPRSS4-219ENST00000616579 ZEB1P37275 1124 aaPredicted RBP13.51□□□□□ -0.25
TMPRSS4-219ENST00000616579 RB1CC1Q8TDY2 1594 aa13.5□□□□□ -0.25
TMPRSS4-219ENST00000616579 CECR2Q9BXF3 1484 aa13.49□□□□□ -0.25
TMPRSS4-219ENST00000616579 NACADO15069 1562 aa13.45□□□□□ -0.26
TMPRSS4-219ENST00000616579 MROH2BQ7Z745 1585 aa13.4□□□□□ -0.26
TMPRSS4-219ENST00000616579 RANGAP1P46060 587 aaPredicted RBP13.39□□□□□ -0.27
TMPRSS4-219ENST00000616579 CCER1Q8TC90 406 aaPredicted RBP13.32□□□□□ -0.28
TMPRSS4-219ENST00000616579 WIZO95785 1651 aa13.3□□□□□ -0.28
TMPRSS4-219ENST00000616579 UBTFP17480 764 aaKnown RBP13.28□□□□□ -0.28
TMPRSS4-219ENST00000616579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.28
TMPRSS4-219ENST00000616579 PELP1Q8IZL8 1130 aaKnown RBP13.25□□□□□ -0.29
TMPRSS4-219ENST00000616579 BAZ1AQ9NRL2 1556 aaPredicted RBP13.22□□□□□ -0.29
TMPRSS4-219ENST00000616579 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
TMPRSS4-219ENST00000616579 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
TMPRSS4-219ENST00000616579 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
TMPRSS4-219ENST00000616579 APLP2Q06481 763 aa13.09□□□□□ -0.31
TMPRSS4-219ENST00000616579 TOP2AP11388 1531 aaKnown RBP13.07□□□□□ -0.32
TMPRSS4-219ENST00000616579 SOGA1O94964 1423 aa13.06□□□□□ -0.32
TMPRSS4-219ENST00000616579 CEP162Q5TB80 1403 aa13.05□□□□□ -0.32
TMPRSS4-219ENST00000616579 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
TMPRSS4-219ENST00000616579 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
TMPRSS4-219ENST00000616579 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
TMPRSS4-219ENST00000616579 DIEXFQ68CQ4 756 aaKnown RBP12.99□□□□□ -0.33
TMPRSS4-219ENST00000616579 SMARCA2P51531 1590 aa12.98□□□□□ -0.33
TMPRSS4-219ENST00000616579 SCAF1Q9H7N4 1312 aaKnown RBP12.98□□□□□ -0.33
TMPRSS4-219ENST00000616579 EEA1Q15075 1411 aa12.97□□□□□ -0.33
TMPRSS4-219ENST00000616579 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.33
TMPRSS4-219ENST00000616579 RUSC2Q8N2Y8 1516 aa12.95□□□□□ -0.34
TMPRSS4-219ENST00000616579 CENPBP07199 599 aaPredicted RBP12.94□□□□□ -0.34
TMPRSS4-219ENST00000616579 MYT1Q01538 1121 aa12.94□□□□□ -0.34
TMPRSS4-219ENST00000616579 GOLGA3Q08378 1498 aa12.92□□□□□ -0.34
TMPRSS4-219ENST00000616579 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
TMPRSS4-219ENST00000616579 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.34
TMPRSS4-219ENST00000616579 YTHDC1Q96MU7 727 aaKnown RBP12.85□□□□□ -0.35
TMPRSS4-219ENST00000616579 CLIP1P30622 1438 aa12.85□□□□□ -0.35
TMPRSS4-219ENST00000616579 ACIN1Q9UKV3 1341 aaKnown RBP12.85□□□□□ -0.35
TMPRSS4-219ENST00000616579 BAZ1BQ9UIG0 1483 aaKnown RBP12.84□□□□□ -0.35
TMPRSS4-219ENST00000616579 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
TMPRSS4-219ENST00000616579 CEP164Q9UPV0 1460 aa12.83□□□□□ -0.36
TMPRSS4-219ENST00000616579 UNC13AQ9UPW8 1703 aa12.83□□□□□ -0.36
TMPRSS4-219ENST00000616579 NEUROD1Q13562 356 aa12.82□□□□□ -0.36
TMPRSS4-219ENST00000616579 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
TMPRSS4-219ENST00000616579 GTF3C3Q9Y5Q9 886 aa12.78□□□□□ -0.36
TMPRSS4-219ENST00000616579 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.36
TMPRSS4-219ENST00000616579 BICRAQ9NZM4 1560 aa12.76□□□□□ -0.37
TMPRSS4-219ENST00000616579 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
TMPRSS4-219ENST00000616579 ITGAEP38570 1179 aa12.74□□□□□ -0.37
TMPRSS4-219ENST00000616579 SYNJ1O43426 1573 aa12.72□□□□□ -0.37
TMPRSS4-219ENST00000616579 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
TMPRSS4-219ENST00000616579 RAPGEF2Q9Y4G8 1499 aa12.71□□□□□ -0.37
TMPRSS4-219ENST00000616579 PEG3Q9GZU2 1588 aa12.65□□□□□ -0.38
TMPRSS4-219ENST00000616579 MIER1Q8N108 512 aa12.65□□□□□ -0.38
TMPRSS4-219ENST00000616579 KIF21BO75037 1637 aa12.63□□□□□ -0.39
TMPRSS4-219ENST00000616579 KANK4Q5T7N3 995 aaPredicted RBP12.6□□□□□ -0.39
TMPRSS4-219ENST00000616579 KIF27Q86VH2 1401 aa12.59□□□□□ -0.39
TMPRSS4-219ENST00000616579 ARID3CA6NKF2 412 aa12.56□□□□□ -0.4
TMPRSS4-219ENST00000616579 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
TMPRSS4-219ENST00000616579 DNAJC5BQ9UF47 199 aa12.53□□□□□ -0.4
TMPRSS4-219ENST00000616579 TOP2BQ02880 1626 aa12.53□□□□□ -0.4
TMPRSS4-219ENST00000616579 FAM50AQ14320 339 aaKnown RBP12.52□□□□□ -0.4
TMPRSS4-219ENST00000616579 NCAPD3P42695 1498 aa12.49□□□□□ -0.41
TMPRSS4-219ENST00000616579 PRXQ9BXM0 1461 aa12.49□□□□□ -0.41
TMPRSS4-219ENST00000616579 CLSPNQ9HAW4 1339 aa12.48□□□□□ -0.41
TMPRSS4-219ENST00000616579 CUX2O14529 1486 aa12.47□□□□□ -0.41
TMPRSS4-219ENST00000616579 DHX57Q6P158 1386 aaKnown RBP12.46□□□□□ -0.41
TMPRSS4-219ENST00000616579 CCNB3Q8WWL7 1395 aa12.46□□□□□ -0.41
TMPRSS4-219ENST00000616579 ARAP1Q96P48 1450 aa12.45□□□□□ -0.42
TMPRSS4-219ENST00000616579 CUX1P39880 1505 aa12.45□□□□□ -0.42
TMPRSS4-219ENST00000616579 ERICH3Q5RHP9 1530 aa12.45□□□□□ -0.42
TMPRSS4-219ENST00000616579 CARMIL1Q5VZK9 1371 aa12.42□□□□□ -0.42
TMPRSS4-219ENST00000616579 CFTRP13569 1480 aa12.41□□□□□ -0.42
TMPRSS4-219ENST00000616579 HMGXB3Q12766 1538 aa12.41□□□□□ -0.42
TMPRSS4-219ENST00000616579 FBLN2P98095 1184 aa12.4□□□□□ -0.42
TMPRSS4-219ENST00000616579 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
TMPRSS4-219ENST00000616579 IGF1RP08069 1367 aa12.39□□□□□ -0.43
TMPRSS4-219ENST00000616579 CADPSQ9ULU8 1353 aa12.38□□□□□ -0.43
TMPRSS4-219ENST00000616579 ARHGAP35Q9NRY4 1499 aa12.38□□□□□ -0.43
TMPRSS4-219ENST00000616579 RAB3GAP2Q9H2M9 1393 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms