RNA–Protein interactions for RNA: ENST00000355832.9

ERCC6-201, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC6, Length 8,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-201ENST00000355832 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
ERCC6-201ENST00000355832 DCAF8L2P0C7V8 631 aa14.44□□□□□ -0.1
ERCC6-201ENST00000355832 MYT1Q01538 1121 aa14.42□□□□□ -0.1
ERCC6-201ENST00000355832 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
ERCC6-201ENST00000355832 ERICH6Q7L0X2 663 aa14.12□□□□□ -0.15
ERCC6-201ENST00000355832 CCER1Q8TC90 406 aaPredicted RBP13.96□□□□□ -0.17
ERCC6-201ENST00000355832 CENPBP07199 599 aaPredicted RBP13.95□□□□□ -0.18
ERCC6-201ENST00000355832 ZEB1P37275 1124 aaPredicted RBP13.79□□□□□ -0.2
ERCC6-201ENST00000355832 PCGF6Q9BYE7 350 aa13.78□□□□□ -0.2
ERCC6-201ENST00000355832 SHROOM4Q9ULL8 1493 aa13.73□□□□□ -0.21
ERCC6-201ENST00000355832 EHMT2Q96KQ7 1210 aa13.73□□□□□ -0.21
ERCC6-201ENST00000355832 NISCHQ9Y2I1 1504 aa13.7□□□□□ -0.22
ERCC6-201ENST00000355832 APLP2Q06481 763 aa13.7□□□□□ -0.22
ERCC6-201ENST00000355832 TTBK1Q5TCY1 1321 aaPredicted RBP13.61□□□□□ -0.23
ERCC6-201ENST00000355832 NEFLP07196 543 aa13.54□□□□□ -0.24
ERCC6-201ENST00000355832 YTHDC1Q96MU7 727 aaKnown RBP13.51□□□□□ -0.25
ERCC6-201ENST00000355832 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.28
ERCC6-201ENST00000355832 DAXXQ9UER7 740 aaPredicted RBP13.26□□□□□ -0.29
ERCC6-201ENST00000355832 HRCP23327 699 aa13.23□□□□□ -0.29
ERCC6-201ENST00000355832 TRIM26Q12899 539 aaPredicted RBP13.17□□□□□ -0.3
ERCC6-201ENST00000355832 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
ERCC6-201ENST00000355832 RTL5Q5HYW3 569 aaPredicted RBP13.1□□□□□ -0.31
ERCC6-201ENST00000355832 RANGAP1P46060 587 aaPredicted RBP13.01□□□□□ -0.33
ERCC6-201ENST00000355832 UBTFP17480 764 aaKnown RBP12.99□□□□□ -0.33
ERCC6-201ENST00000355832 ATP1B4Q9UN42 357 aaPredicted RBP12.96□□□□□ -0.34
ERCC6-201ENST00000355832 ZNF316A6NFI3 1004 aaPredicted RBP12.92□□□□□ -0.34
ERCC6-201ENST00000355832 DIEXFQ68CQ4 756 aaKnown RBP12.89□□□□□ -0.35
ERCC6-201ENST00000355832 PPARGC1BQ86YN6 1023 aaKnown RBP12.87□□□□□ -0.35
ERCC6-201ENST00000355832 GLIPR1L2Q4G1C9 344 aa12.81□□□□□ -0.36
ERCC6-201ENST00000355832 GTF3C3Q9Y5Q9 886 aa12.8□□□□□ -0.36
ERCC6-201ENST00000355832 EIF5BO60841 1220 aaKnown RBP12.74□□□□□ -0.37
ERCC6-201ENST00000355832 CLSPNQ9HAW4 1339 aa12.72□□□□□ -0.37
ERCC6-201ENST00000355832 CDK11AQ9UQ88 783 aaPredicted RBP12.71□□□□□ -0.37
ERCC6-201ENST00000355832 POLR3GLQ9BT43 218 aa12.7□□□□□ -0.38
ERCC6-201ENST00000355832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.63□□□□□ -0.39
ERCC6-201ENST00000355832 LOC105371045A0A1W2PR82 267 aa12.63□□□□□ -0.39
ERCC6-201ENST00000355832 ITGAEP38570 1179 aa12.62□□□□□ -0.39
ERCC6-201ENST00000355832 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
ERCC6-201ENST00000355832 BCANQ96GW7 911 aa12.59□□□□□ -0.39
ERCC6-201ENST00000355832 ACIN1Q9UKV3 1341 aaKnown RBP12.59□□□□□ -0.39
ERCC6-201ENST00000355832 CNGB1Q14028 1251 aaPredicted RBP12.55□□□□□ -0.4
ERCC6-201ENST00000355832 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
ERCC6-201ENST00000355832 ANP32AP39687 249 aaKnown RBP12.54□□□□□ -0.4
ERCC6-201ENST00000355832 CHIC1Q5VXU3 224 aa12.53□□□□□ -0.4
ERCC6-201ENST00000355832 ANP32CO43423 234 aa12.5□□□□□ -0.41
ERCC6-201ENST00000355832 ANP32BQ92688 251 aaKnown RBP12.41□□□□□ -0.42
ERCC6-201ENST00000355832 SLC4A1APQ9BWU0 796 aaKnown RBP12.4□□□□□ -0.42
ERCC6-201ENST00000355832 ZBTB47Q9UFB7 747 aaPredicted RBP12.37□□□□□ -0.43
ERCC6-201ENST00000355832 NEUROD1Q13562 356 aa12.33□□□□□ -0.44
ERCC6-201ENST00000355832 NPM2Q86SE8 214 aaKnown RBP12.3□□□□□ -0.44
ERCC6-201ENST00000355832 FAM50AQ14320 339 aaKnown RBP12.3□□□□□ -0.44
ERCC6-201ENST00000355832 CANXP27824 592 aaKnown RBP12.28□□□□□ -0.44
ERCC6-201ENST00000355832 FKBP8Q14318 412 aa12.28□□□□□ -0.44
ERCC6-201ENST00000355832 NBR1Q14596 966 aa12.25□□□□□ -0.45
ERCC6-201ENST00000355832 TNNT2P45379 298 aaPredicted RBP12.24□□□□□ -0.45
ERCC6-201ENST00000355832 TRIM52Q96A61 297 aa12.23□□□□□ -0.45
ERCC6-201ENST00000355832 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
ERCC6-201ENST00000355832 UPF2Q9HAU5 1272 aaKnown RBP12.2□□□□□ -0.46
ERCC6-201ENST00000355832 HSP90AA1P07900 732 aaKnown RBP12.2□□□□□ -0.46
ERCC6-201ENST00000355832 DCAF1Q9Y4B6 1507 aa12.14□□□□□ -0.47
ERCC6-201ENST00000355832 ANP32EQ9BTT0 268 aa12.11□□□□□ -0.47
ERCC6-201ENST00000355832 ZNF326Q5BKZ1 582 aaKnown RBP12.1□□□□□ -0.47
ERCC6-201ENST00000355832 BCL11AQ9H165 835 aa12.1□□□□□ -0.47
ERCC6-201ENST00000355832 NEFMP07197 916 aa12.09□□□□□ -0.47
ERCC6-201ENST00000355832 CDK11BP21127 795 aaKnown RBP12.08□□□□□ -0.47
ERCC6-201ENST00000355832 HNRNPUQ00839 825 aaKnown RBP eCLIP12.08□□□□□ -0.48
ERCC6-201ENST00000355832 CCDC136Q96JN2 1154 aa12.07□□□□□ -0.48
ERCC6-201ENST00000355832 ARXQ96QS3 562 aa12.06□□□□□ -0.48
ERCC6-201ENST00000355832 TRIM44Q96DX7 344 aaPredicted RBP12.03□□□□□ -0.48
ERCC6-201ENST00000355832 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.49
ERCC6-201ENST00000355832 CCDC180Q9P1Z9 1646 aa12.01□□□□□ -0.49
ERCC6-201ENST00000355832 SLC24A1O60721 1099 aa11.99□□□□□ -0.49
ERCC6-201ENST00000355832 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.97□□□□□ -0.49
ERCC6-201ENST00000355832 FAM9BQ8IZU0 186 aa11.97□□□□□ -0.49
ERCC6-201ENST00000355832 ERICH6BQ5W0A0 696 aa11.97□□□□□ -0.49
ERCC6-201ENST00000355832 TONSLQ96HA7 1378 aa11.96□□□□□ -0.49
ERCC6-201ENST00000355832 BECN1Q14457 450 aa11.96□□□□□ -0.5
ERCC6-201ENST00000355832 DDX10Q13206 875 aaKnown RBP11.95□□□□□ -0.5
ERCC6-201ENST00000355832 NAP1L5Q96NT1 182 aaPredicted RBP11.93□□□□□ -0.5
ERCC6-201ENST00000355832 NCLP19338 710 aaKnown RBP11.92□□□□□ -0.5
ERCC6-201ENST00000355832 MIER1Q8N108 512 aa11.91□□□□□ -0.5
ERCC6-201ENST00000355832 TMC1Q8TDI8 760 aa11.9□□□□□ -0.5
ERCC6-201ENST00000355832 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
ERCC6-201ENST00000355832 AMER1Q5JTC6 1135 aaPredicted RBP11.88□□□□□ -0.51
ERCC6-201ENST00000355832 PPM1GO15355 546 aaPredicted RBP11.88□□□□□ -0.51
ERCC6-201ENST00000355832 GOLGA6L22H0YM25 854 aa11.87□□□□□ -0.51
ERCC6-201ENST00000355832 IRX6P78412 446 aaPredicted RBP11.86□□□□□ -0.51
ERCC6-201ENST00000355832 DNTTIP2Q5QJE6 756 aaKnown RBP11.85□□□□□ -0.51
ERCC6-201ENST00000355832 SALL2Q9Y467 1007 aaPredicted RBP11.83□□□□□ -0.52
ERCC6-201ENST00000355832 NOP58Q9Y2X3 529 aaKnown RBP11.83□□□□□ -0.52
ERCC6-201ENST00000355832 MRS2Q9HD23 443 aa11.82□□□□□ -0.52
ERCC6-201ENST00000355832 PTMAP06454 111 aaKnown RBP11.8□□□□□ -0.52
ERCC6-201ENST00000355832 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.52
ERCC6-201ENST00000355832 MYH16Q9H6N6 1097 aa11.78□□□□□ -0.52
ERCC6-201ENST00000355832 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
ERCC6-201ENST00000355832 DEKP35659 375 aaKnown RBP11.76□□□□□ -0.53
ERCC6-201ENST00000355832 SUPT16HQ9Y5B9 1047 aaKnown RBP11.72□□□□□ -0.53
ERCC6-201ENST00000355832 LAS1LQ9Y4W2 734 aaKnown RBP11.72□□□□□ -0.53
ERCC6-201ENST00000355832 PPP4R2Q9NY27 417 aa11.71□□□□□ -0.54
ERCC6-201ENST00000355832 L1TD1Q5T7N2 865 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms