RNA–Protein interactions for RNA: ENST00000638112.1

GABRA1-219, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GABRA1, Length 2,818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-219ENST00000638112 NISCHQ9Y2I1 1504 aa18.57■□□□□ 0.56
GABRA1-219ENST00000638112 CCDC180Q9P1Z9 1646 aa16.36■□□□□ 0.21
GABRA1-219ENST00000638112 ABCC9O60706 1549 aa16.03■□□□□ 0.16
GABRA1-219ENST00000638112 PELP1Q8IZL8 1130 aaKnown RBP15.81■□□□□ 0.12
GABRA1-219ENST00000638112 HRCP23327 699 aa15.63■□□□□ 0.09
GABRA1-219ENST00000638112 DCAF8L2P0C7V8 631 aa15.59■□□□□ 0.09
GABRA1-219ENST00000638112 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
GABRA1-219ENST00000638112 ZCCHC6Q5VYS8 1495 aaKnown RBP15.48■□□□□ 0.07
GABRA1-219ENST00000638112 MYT1Q01538 1121 aa15.41■□□□□ 0.06
GABRA1-219ENST00000638112 NACADO15069 1562 aa15.38■□□□□ 0.05
GABRA1-219ENST00000638112 RB1CC1Q8TDY2 1594 aa15.37■□□□□ 0.05
GABRA1-219ENST00000638112 DCAF1Q9Y4B6 1507 aa15.3■□□□□ 0.04
GABRA1-219ENST00000638112 MYO15BQ96JP2 1530 aa15.3■□□□□ 0.04
GABRA1-219ENST00000638112 SCAF1Q9H7N4 1312 aaKnown RBP15.24■□□□□ 0.03
GABRA1-219ENST00000638112 PCGF6Q9BYE7 350 aa15.2■□□□□ 0.02
GABRA1-219ENST00000638112 UNC13AQ9UPW8 1703 aa15.05■□□□□ 0
GABRA1-219ENST00000638112 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ 0
GABRA1-219ENST00000638112 SCRIBQ14160 1630 aa15.04■□□□□ -0
GABRA1-219ENST00000638112 BICRAQ9NZM4 1560 aa14.96□□□□□ -0.01
GABRA1-219ENST00000638112 SHROOM4Q9ULL8 1493 aa14.87□□□□□ -0.03
GABRA1-219ENST00000638112 DNAJC5BQ9UF47 199 aa14.66□□□□□ -0.06
GABRA1-219ENST00000638112 TTBK1Q5TCY1 1321 aaPredicted RBP14.65□□□□□ -0.06
GABRA1-219ENST00000638112 NEUROD1Q13562 356 aa14.62□□□□□ -0.07
GABRA1-219ENST00000638112 GTF3C3Q9Y5Q9 886 aa14.61□□□□□ -0.07
GABRA1-219ENST00000638112 ACIN1Q9UKV3 1341 aaKnown RBP14.59□□□□□ -0.07
GABRA1-219ENST00000638112 BCL11AQ9H165 835 aa14.56□□□□□ -0.08
GABRA1-219ENST00000638112 SUPT5HO00267 1087 aaKnown RBP14.55□□□□□ -0.08
GABRA1-219ENST00000638112 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
GABRA1-219ENST00000638112 ZEB1P37275 1124 aaPredicted RBP14.52□□□□□ -0.09
GABRA1-219ENST00000638112 CECR2Q9BXF3 1484 aa14.52□□□□□ -0.09
GABRA1-219ENST00000638112 FAM9AQ8IZU1 332 aaPredicted RBP14.48□□□□□ -0.09
GABRA1-219ENST00000638112 PRKCSHP14314 528 aaPredicted RBP14.46□□□□□ -0.1
GABRA1-219ENST00000638112 CC2D2AQ9P2K1 1620 aa14.46□□□□□ -0.1
GABRA1-219ENST00000638112 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
GABRA1-219ENST00000638112 SMARCA4P51532 1647 aa14.36□□□□□ -0.11
GABRA1-219ENST00000638112 CHIC1Q5VXU3 224 aa14.36□□□□□ -0.11
GABRA1-219ENST00000638112 MROH2BQ7Z745 1585 aa14.35□□□□□ -0.11
GABRA1-219ENST00000638112 BAZ1AQ9NRL2 1556 aaPredicted RBP14.35□□□□□ -0.11
GABRA1-219ENST00000638112 CENPBP07199 599 aaPredicted RBP14.35□□□□□ -0.11
GABRA1-219ENST00000638112 ATAD2BQ9ULI0 1458 aa14.28□□□□□ -0.12
GABRA1-219ENST00000638112 LOC105371045A0A1W2PR82 267 aa14.25□□□□□ -0.13
GABRA1-219ENST00000638112 RSF1Q96T23 1441 aaPredicted RBP14.23□□□□□ -0.13
GABRA1-219ENST00000638112 NCAPD3P42695 1498 aa14.23□□□□□ -0.13
GABRA1-219ENST00000638112 SMARCA2P51531 1590 aa14.22□□□□□ -0.13
GABRA1-219ENST00000638112 WIZO95785 1651 aa14.19□□□□□ -0.14
GABRA1-219ENST00000638112 PEG3Q9GZU2 1588 aa14.19□□□□□ -0.14
GABRA1-219ENST00000638112 BAZ1BQ9UIG0 1483 aaKnown RBP14.16□□□□□ -0.14
GABRA1-219ENST00000638112 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
GABRA1-219ENST00000638112 YTHDC1Q96MU7 727 aaKnown RBP14.12□□□□□ -0.15
GABRA1-219ENST00000638112 ANP32EQ9BTT0 268 aa14.08□□□□□ -0.16
GABRA1-219ENST00000638112 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
GABRA1-219ENST00000638112 DIEXFQ68CQ4 756 aaKnown RBP14.06□□□□□ -0.16
GABRA1-219ENST00000638112 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
GABRA1-219ENST00000638112 NESP48681 1621 aa13.92□□□□□ -0.18
GABRA1-219ENST00000638112 ERICH6Q7L0X2 663 aa13.89□□□□□ -0.19
GABRA1-219ENST00000638112 CCDC88BA6NC98 1476 aa13.89□□□□□ -0.19
GABRA1-219ENST00000638112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.88□□□□□ -0.19
GABRA1-219ENST00000638112 CADPSQ9ULU8 1353 aa13.84□□□□□ -0.19
GABRA1-219ENST00000638112 CCER1Q8TC90 406 aaPredicted RBP13.81□□□□□ -0.2
GABRA1-219ENST00000638112 TSHZ2Q9NRE2 1034 aa13.8□□□□□ -0.2
GABRA1-219ENST00000638112 LAMC3Q9Y6N6 1575 aa13.8□□□□□ -0.2
GABRA1-219ENST00000638112 CFTRP13569 1480 aa13.78□□□□□ -0.2
GABRA1-219ENST00000638112 APLP2Q06481 763 aa13.77□□□□□ -0.21
GABRA1-219ENST00000638112 ERCC6Q03468 1493 aa13.76□□□□□ -0.21
GABRA1-219ENST00000638112 PDS5BQ9NTI5 1447 aa13.73□□□□□ -0.21
GABRA1-219ENST00000638112 EHMT2Q96KQ7 1210 aa13.71□□□□□ -0.21
GABRA1-219ENST00000638112 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
GABRA1-219ENST00000638112 ANO8Q9HCE9 1232 aaPredicted RBP13.69□□□□□ -0.22
GABRA1-219ENST00000638112 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
GABRA1-219ENST00000638112 MIER1Q8N108 512 aa13.68□□□□□ -0.22
GABRA1-219ENST00000638112 FANCD2Q9BXW9 1451 aa13.68□□□□□ -0.22
GABRA1-219ENST00000638112 TRIM41Q8WV44 630 aa13.68□□□□□ -0.22
GABRA1-219ENST00000638112 SUPT16HQ9Y5B9 1047 aaKnown RBP13.68□□□□□ -0.22
GABRA1-219ENST00000638112 CEP164Q9UPV0 1460 aa13.64□□□□□ -0.23
GABRA1-219ENST00000638112 PRDM2Q13029 1718 aa13.6□□□□□ -0.23
GABRA1-219ENST00000638112 THOC2Q8NI27 1593 aaKnown RBP13.6□□□□□ -0.23
GABRA1-219ENST00000638112 MRC2Q9UBG0 1479 aa13.58□□□□□ -0.24
GABRA1-219ENST00000638112 ZNF316A6NFI3 1004 aaPredicted RBP13.57□□□□□ -0.24
GABRA1-219ENST00000638112 URB2Q14146 1524 aaKnown RBP13.55□□□□□ -0.24
GABRA1-219ENST00000638112 BCANQ96GW7 911 aa13.54□□□□□ -0.24
GABRA1-219ENST00000638112 WDR62O43379 1518 aa13.52□□□□□ -0.25
GABRA1-219ENST00000638112 CUX2O14529 1486 aa13.51□□□□□ -0.25
GABRA1-219ENST00000638112 CCDC136Q96JN2 1154 aa13.5□□□□□ -0.25
GABRA1-219ENST00000638112 TOPBP1Q92547 1522 aa13.48□□□□□ -0.25
GABRA1-219ENST00000638112 SALL2Q9Y467 1007 aaPredicted RBP13.45□□□□□ -0.26
GABRA1-219ENST00000638112 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
GABRA1-219ENST00000638112 DNMBPQ6XZF7 1577 aa13.44□□□□□ -0.26
GABRA1-219ENST00000638112 CUX1P39880 1505 aa13.44□□□□□ -0.26
GABRA1-219ENST00000638112 RBM19Q9Y4C8 960 aaKnown RBP13.42□□□□□ -0.26
GABRA1-219ENST00000638112 MSH5O43196 834 aa13.4□□□□□ -0.26
GABRA1-219ENST00000638112 WRNQ14191 1432 aaPredicted RBP eCLIP13.4□□□□□ -0.26
GABRA1-219ENST00000638112 POLA1P09884 1462 aaPredicted RBP13.38□□□□□ -0.27
GABRA1-219ENST00000638112 FGD5Q6ZNL6 1462 aa13.37□□□□□ -0.27
GABRA1-219ENST00000638112 SYNJ1O43426 1573 aa13.36□□□□□ -0.27
GABRA1-219ENST00000638112 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
GABRA1-219ENST00000638112 SOGA1O94964 1423 aa13.33□□□□□ -0.27
GABRA1-219ENST00000638112 DEKP35659 375 aaKnown RBP13.33□□□□□ -0.28
GABRA1-219ENST00000638112 ZNF608Q9ULD9 1512 aaPredicted RBP13.33□□□□□ -0.28
GABRA1-219ENST00000638112 IFT140Q96RY7 1462 aa13.33□□□□□ -0.28
GABRA1-219ENST00000638112 TOP2BQ02880 1626 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms