RNA–Protein interactions for RNA: ENST00000496596.1

RPL4P1-201, Transcript of ribosomal protein L4 pseudogene 1, humanhuman

BASIC

Gene RPL4P1, Length 1,278 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4P1-201ENST00000496596 AEBP2Q6ZN18 517 aaPredicted RBP23.72■■□□□ 1.39
RPL4P1-201ENST00000496596 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
RPL4P1-201ENST00000496596 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
RPL4P1-201ENST00000496596 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
RPL4P1-201ENST00000496596 FOXD1Q16676 465 aa18.86■□□□□ 0.61
RPL4P1-201ENST00000496596 NISCHQ9Y2I1 1504 aa18.39■□□□□ 0.53
RPL4P1-201ENST00000496596 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
RPL4P1-201ENST00000496596 MSH5O43196 834 aa17.68■□□□□ 0.42
RPL4P1-201ENST00000496596 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
RPL4P1-201ENST00000496596 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
RPL4P1-201ENST00000496596 ADRA2BP18089 450 aa17.61■□□□□ 0.41
RPL4P1-201ENST00000496596 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
RPL4P1-201ENST00000496596 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
RPL4P1-201ENST00000496596 MAPK8IP2Q13387 824 aaPredicted RBP16.16■□□□□ 0.18
RPL4P1-201ENST00000496596 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
RPL4P1-201ENST00000496596 CCDC180Q9P1Z9 1646 aa16.02■□□□□ 0.16
RPL4P1-201ENST00000496596 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
RPL4P1-201ENST00000496596 CNKSR2Q8WXI2 1034 aa15.56■□□□□ 0.08
RPL4P1-201ENST00000496596 HOXD11P31277 338 aaPredicted RBP15.51■□□□□ 0.07
RPL4P1-201ENST00000496596 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.06
RPL4P1-201ENST00000496596 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
RPL4P1-201ENST00000496596 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
RPL4P1-201ENST00000496596 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
RPL4P1-201ENST00000496596 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.04
RPL4P1-201ENST00000496596 DCAF8L2P0C7V8 631 aa15.19■□□□□ 0.02
RPL4P1-201ENST00000496596 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
RPL4P1-201ENST00000496596 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
RPL4P1-201ENST00000496596 RNF39Q9H2S5 420 aa15.06■□□□□ 0
RPL4P1-201ENST00000496596 NPM3O75607 178 aaKnown RBP15.01□□□□□ -0.01
RPL4P1-201ENST00000496596 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
RPL4P1-201ENST00000496596 SHROOM4Q9ULL8 1493 aa15□□□□□ -0.01
RPL4P1-201ENST00000496596 ABCC9O60706 1549 aa14.97□□□□□ -0.01
RPL4P1-201ENST00000496596 NACADO15069 1562 aa14.94□□□□□ -0.02
RPL4P1-201ENST00000496596 C1QBPQ07021 282 aaKnown RBP14.88□□□□□ -0.03
RPL4P1-201ENST00000496596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.78□□□□□ -0.04
RPL4P1-201ENST00000496596 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.05
RPL4P1-201ENST00000496596 KCNA4P22459 653 aa14.75□□□□□ -0.05
RPL4P1-201ENST00000496596 SCRIBQ14160 1630 aa14.66□□□□□ -0.06
RPL4P1-201ENST00000496596 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
RPL4P1-201ENST00000496596 U3KPZ7 1027 aaPredicted RBP14.45□□□□□ -0.1
RPL4P1-201ENST00000496596 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
RPL4P1-201ENST00000496596 UNC13AQ9UPW8 1703 aa14.31□□□□□ -0.12
RPL4P1-201ENST00000496596 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
RPL4P1-201ENST00000496596 BAZ1AQ9NRL2 1556 aaPredicted RBP14.24□□□□□ -0.13
RPL4P1-201ENST00000496596 CAPN15O75808 1086 aa14.22□□□□□ -0.13
RPL4P1-201ENST00000496596 SPINK5Q9NQ38 1064 aaPredicted RBP14.22□□□□□ -0.13
RPL4P1-201ENST00000496596 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
RPL4P1-201ENST00000496596 BICRAQ9NZM4 1560 aa14.18□□□□□ -0.14
RPL4P1-201ENST00000496596 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
RPL4P1-201ENST00000496596 PABPN1Q86U42 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
RPL4P1-201ENST00000496596 DSG3P32926 999 aa14.12□□□□□ -0.15
RPL4P1-201ENST00000496596 APLP2Q06481 763 aa14.12□□□□□ -0.15
RPL4P1-201ENST00000496596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.11□□□□□ -0.15
RPL4P1-201ENST00000496596 HNRNPUL2Q1KMD3 747 aaKnown RBP14.11□□□□□ -0.15
RPL4P1-201ENST00000496596 SMARCA4P51532 1647 aa14.09□□□□□ -0.15
RPL4P1-201ENST00000496596 WIZO95785 1651 aa14.03□□□□□ -0.16
RPL4P1-201ENST00000496596 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
RPL4P1-201ENST00000496596 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
RPL4P1-201ENST00000496596 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
RPL4P1-201ENST00000496596 TOP2AP11388 1531 aaKnown RBP13.96□□□□□ -0.17
RPL4P1-201ENST00000496596 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.18
RPL4P1-201ENST00000496596 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
RPL4P1-201ENST00000496596 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
RPL4P1-201ENST00000496596 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
RPL4P1-201ENST00000496596 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
RPL4P1-201ENST00000496596 ABCB7O75027 752 aa13.85□□□□□ -0.19
RPL4P1-201ENST00000496596 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
RPL4P1-201ENST00000496596 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
RPL4P1-201ENST00000496596 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
RPL4P1-201ENST00000496596 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
RPL4P1-201ENST00000496596 TRIM41Q8WV44 630 aa13.77□□□□□ -0.21
RPL4P1-201ENST00000496596 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
RPL4P1-201ENST00000496596 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
RPL4P1-201ENST00000496596 POLA2Q14181 598 aa13.64□□□□□ -0.23
RPL4P1-201ENST00000496596 CC2D2AQ9P2K1 1620 aa13.56□□□□□ -0.24
RPL4P1-201ENST00000496596 ATF5Q9Y2D1 282 aaPredicted RBP13.54□□□□□ -0.24
RPL4P1-201ENST00000496596 ZBTB22O15209 634 aa13.53□□□□□ -0.24
RPL4P1-201ENST00000496596 RBM42Q9BTD8 480 aaKnown RBP13.51□□□□□ -0.25
RPL4P1-201ENST00000496596 WRNQ14191 1432 aaPredicted RBP eCLIP13.49□□□□□ -0.25
RPL4P1-201ENST00000496596 ABCC8Q09428 1581 aa13.48□□□□□ -0.25
RPL4P1-201ENST00000496596 POTEHQ6S545 545 aa13.46□□□□□ -0.25
RPL4P1-201ENST00000496596 CFTRP13569 1480 aa13.46□□□□□ -0.25
RPL4P1-201ENST00000496596 EEA1Q15075 1411 aa13.46□□□□□ -0.26
RPL4P1-201ENST00000496596 FAM9AQ8IZU1 332 aaPredicted RBP13.41□□□□□ -0.26
RPL4P1-201ENST00000496596 CADPSQ9ULU8 1353 aa13.41□□□□□ -0.26
RPL4P1-201ENST00000496596 LOC105371045A0A1W2PR82 267 aa13.4□□□□□ -0.26
RPL4P1-201ENST00000496596 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
RPL4P1-201ENST00000496596 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
RPL4P1-201ENST00000496596 PRDM2Q13029 1718 aa13.38□□□□□ -0.27
RPL4P1-201ENST00000496596 TOP2BQ02880 1626 aa13.35□□□□□ -0.27
RPL4P1-201ENST00000496596 SYNJ1O43426 1573 aa13.34□□□□□ -0.27
RPL4P1-201ENST00000496596 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
RPL4P1-201ENST00000496596 BIVM-ERCC5R4GMW8 1640 aa13.32□□□□□ -0.28
RPL4P1-201ENST00000496596 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
RPL4P1-201ENST00000496596 SOGA1O94964 1423 aa13.29□□□□□ -0.28
RPL4P1-201ENST00000496596 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
RPL4P1-201ENST00000496596 FANCD2Q9BXW9 1451 aa13.24□□□□□ -0.29
RPL4P1-201ENST00000496596 CUX1P39880 1505 aa13.23□□□□□ -0.29
RPL4P1-201ENST00000496596 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
RPL4P1-201ENST00000496596 GOLGA3Q08378 1498 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms