RNA–Protein interactions for RNA: ENST00000519336.1

LINC01339-203, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3 BASIC

Gene LINC01339, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-203ENST00000519336 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
LINC01339-203ENST00000519336 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
LINC01339-203ENST00000519336 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
LINC01339-203ENST00000519336 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
LINC01339-203ENST00000519336 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
LINC01339-203ENST00000519336 FOXD1Q16676 465 aa16.05■□□□□ 0.16
LINC01339-203ENST00000519336 ADRA2BP18089 450 aa15.88■□□□□ 0.13
LINC01339-203ENST00000519336 PPP6R1Q9UPN7 881 aa15.83■□□□□ 0.12
LINC01339-203ENST00000519336 PIAS4Q8N2W9 510 aaPredicted RBP15.3■□□□□ 0.04
LINC01339-203ENST00000519336 KCNA4P22459 653 aa15.18■□□□□ 0.02
LINC01339-203ENST00000519336 PPP4R3CPQ6ZMV5 832 aa14.96□□□□□ -0.01
LINC01339-203ENST00000519336 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
LINC01339-203ENST00000519336 NCBP3Q53F19 620 aaKnown RBP14.72□□□□□ -0.05
LINC01339-203ENST00000519336 MSH5O43196 834 aa14.6□□□□□ -0.07
LINC01339-203ENST00000519336 SLC4A1APQ9BWU0 796 aaKnown RBP14.56□□□□□ -0.08
LINC01339-203ENST00000519336 SCAF1Q9H7N4 1312 aaKnown RBP14.51□□□□□ -0.09
LINC01339-203ENST00000519336 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
LINC01339-203ENST00000519336 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
LINC01339-203ENST00000519336 MAPK8IP2Q13387 824 aaPredicted RBP14.27□□□□□ -0.13
LINC01339-203ENST00000519336 CSRNP3Q8WYN3 585 aa14.27□□□□□ -0.13
LINC01339-203ENST00000519336 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
LINC01339-203ENST00000519336 ZBTB22O15209 634 aa13.94□□□□□ -0.18
LINC01339-203ENST00000519336 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
LINC01339-203ENST00000519336 DNAJC5BQ9UF47 199 aa13.82□□□□□ -0.2
LINC01339-203ENST00000519336 FOXD4L1Q9NU39 408 aa13.81□□□□□ -0.2
LINC01339-203ENST00000519336 HOXD11P31277 338 aaPredicted RBP13.77□□□□□ -0.21
LINC01339-203ENST00000519336 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
LINC01339-203ENST00000519336 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
LINC01339-203ENST00000519336 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
LINC01339-203ENST00000519336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.29
LINC01339-203ENST00000519336 ATXN8OSP0DMR3 200 aa13.23□□□□□ -0.29
LINC01339-203ENST00000519336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
LINC01339-203ENST00000519336 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
LINC01339-203ENST00000519336 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
LINC01339-203ENST00000519336 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
LINC01339-203ENST00000519336 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
LINC01339-203ENST00000519336 FKBP8Q14318 412 aa12.94□□□□□ -0.34
LINC01339-203ENST00000519336 APLP2Q06481 763 aa12.79□□□□□ -0.36
LINC01339-203ENST00000519336 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
LINC01339-203ENST00000519336 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
LINC01339-203ENST00000519336 RTN4Q9NQC3 1192 aaKnown RBP12.61□□□□□ -0.39
LINC01339-203ENST00000519336 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
LINC01339-203ENST00000519336 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
LINC01339-203ENST00000519336 CAPN15O75808 1086 aa12.54□□□□□ -0.4
LINC01339-203ENST00000519336 RNF39Q9H2S5 420 aa12.54□□□□□ -0.4
LINC01339-203ENST00000519336 POLA2Q14181 598 aa12.47□□□□□ -0.41
LINC01339-203ENST00000519336 FBLN2P98095 1184 aa12.46□□□□□ -0.41
LINC01339-203ENST00000519336 POTEDQ86YR6 584 aa12.46□□□□□ -0.41
LINC01339-203ENST00000519336 SPDYE4A6NLX3 237 aa12.44□□□□□ -0.42
LINC01339-203ENST00000519336 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
LINC01339-203ENST00000519336 C1QBPQ07021 282 aaKnown RBP12.42□□□□□ -0.42
LINC01339-203ENST00000519336 ABCB7O75027 752 aa12.35□□□□□ -0.43
LINC01339-203ENST00000519336 FBXO3Q9UK99 471 aa12.31□□□□□ -0.44
LINC01339-203ENST00000519336 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
LINC01339-203ENST00000519336 SLC24A1O60721 1099 aa12.19□□□□□ -0.46
LINC01339-203ENST00000519336 PROM2Q8N271 834 aa12.16□□□□□ -0.46
LINC01339-203ENST00000519336 DSG3P32926 999 aa12.12□□□□□ -0.47
LINC01339-203ENST00000519336 VASPP50552 380 aaPredicted RBP12.12□□□□□ -0.47
LINC01339-203ENST00000519336 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
LINC01339-203ENST00000519336 OSCARQ8IYS5 282 aa12.02□□□□□ -0.49
LINC01339-203ENST00000519336 IFNLR1Q8IU57 520 aaPredicted RBP11.99□□□□□ -0.49
LINC01339-203ENST00000519336 CACNB1Q02641 598 aaPredicted RBP11.96□□□□□ -0.49
LINC01339-203ENST00000519336 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
LINC01339-203ENST00000519336 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
LINC01339-203ENST00000519336 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
LINC01339-203ENST00000519336 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
LINC01339-203ENST00000519336 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC01339-203ENST00000519336 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
LINC01339-203ENST00000519336 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
LINC01339-203ENST00000519336 STAG3Q9UJ98 1225 aa11.85□□□□□ -0.51
LINC01339-203ENST00000519336 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
LINC01339-203ENST00000519336 MIER1Q8N108 512 aa11.79□□□□□ -0.52
LINC01339-203ENST00000519336 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
LINC01339-203ENST00000519336 PKD2Q13563 968 aa11.76□□□□□ -0.53
LINC01339-203ENST00000519336 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
LINC01339-203ENST00000519336 ECM2O94769 699 aaPredicted RBP11.67□□□□□ -0.54
LINC01339-203ENST00000519336 PLCB2Q00722 1185 aa11.64□□□□□ -0.55
LINC01339-203ENST00000519336 ZBTB47Q9UFB7 747 aaPredicted RBP11.61□□□□□ -0.55
LINC01339-203ENST00000519336 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
LINC01339-203ENST00000519336 HAP1P54257 671 aaPredicted RBP11.57□□□□□ -0.56
LINC01339-203ENST00000519336 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
LINC01339-203ENST00000519336 CLEC11AQ9Y240 323 aa11.53□□□□□ -0.56
LINC01339-203ENST00000519336 RGL2O15211 777 aa11.51□□□□□ -0.57
LINC01339-203ENST00000519336 SPDYE1Q8NFV5 336 aaPredicted RBP11.51□□□□□ -0.57
LINC01339-203ENST00000519336 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
LINC01339-203ENST00000519336 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.48□□□□□ -0.57
LINC01339-203ENST00000519336 BBXQ8WY36 941 aaPredicted RBP11.45□□□□□ -0.58
LINC01339-203ENST00000519336 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC01339-203ENST00000519336 PRR29P0C7W0 189 aa11.44□□□□□ -0.58
LINC01339-203ENST00000519336 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
LINC01339-203ENST00000519336 PAXIP1Q6ZW49 1069 aaPredicted RBP11.41□□□□□ -0.58
LINC01339-203ENST00000519336 REM2Q8IYK8 340 aaPredicted RBP11.41□□□□□ -0.58
LINC01339-203ENST00000519336 CHGAP10645 457 aaKnown RBP11.39□□□□□ -0.59
LINC01339-203ENST00000519336 DCAF8Q5TAQ9 597 aa11.39□□□□□ -0.59
LINC01339-203ENST00000519336 GSE1Q14687 1217 aa11.38□□□□□ -0.59
LINC01339-203ENST00000519336 TRIM41Q8WV44 630 aa11.37□□□□□ -0.59
LINC01339-203ENST00000519336 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
LINC01339-203ENST00000519336 NUBP1P53384 320 aa11.34□□□□□ -0.59
LINC01339-203ENST00000519336 SPRYD3Q8NCJ5 442 aa11.31□□□□□ -0.6
LINC01339-203ENST00000519336 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms