RNA–Protein interactions for RNA: ENST00000532441.5

AP002004.1-206, humanhuman

BASIC

Gene AP002004.1, Length 876 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002004.1-206ENST00000532441 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
AP002004.1-206ENST00000532441 AEBP2Q6ZN18 517 aaPredicted RBP20.49■□□□□ 0.87
AP002004.1-206ENST00000532441 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
AP002004.1-206ENST00000532441 NISCHQ9Y2I1 1504 aa17.47■□□□□ 0.39
AP002004.1-206ENST00000532441 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
AP002004.1-206ENST00000532441 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
AP002004.1-206ENST00000532441 FOXD1Q16676 465 aa16■□□□□ 0.15
AP002004.1-206ENST00000532441 ABCC9O60706 1549 aa15.84■□□□□ 0.13
AP002004.1-206ENST00000532441 ADRA2BP18089 450 aa15.84■□□□□ 0.13
AP002004.1-206ENST00000532441 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
AP002004.1-206ENST00000532441 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
AP002004.1-206ENST00000532441 KCNA4P22459 653 aa15.26■□□□□ 0.03
AP002004.1-206ENST00000532441 PIAS4Q8N2W9 510 aaPredicted RBP15.22■□□□□ 0.03
AP002004.1-206ENST00000532441 RB1CC1Q8TDY2 1594 aa14.99□□□□□ -0.01
AP002004.1-206ENST00000532441 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
AP002004.1-206ENST00000532441 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
AP002004.1-206ENST00000532441 DCAF8L2P0C7V8 631 aa14.85□□□□□ -0.03
AP002004.1-206ENST00000532441 EHMT2Q96KQ7 1210 aa14.85□□□□□ -0.03
AP002004.1-206ENST00000532441 NACADO15069 1562 aa14.85□□□□□ -0.03
AP002004.1-206ENST00000532441 UNC13AQ9UPW8 1703 aa14.78□□□□□ -0.04
AP002004.1-206ENST00000532441 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
AP002004.1-206ENST00000532441 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
AP002004.1-206ENST00000532441 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
AP002004.1-206ENST00000532441 BICRAQ9NZM4 1560 aa14.6□□□□□ -0.07
AP002004.1-206ENST00000532441 MYO15BQ96JP2 1530 aa14.56□□□□□ -0.08
AP002004.1-206ENST00000532441 MSH5O43196 834 aa14.54□□□□□ -0.08
AP002004.1-206ENST00000532441 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
AP002004.1-206ENST00000532441 SCAF1Q9H7N4 1312 aaKnown RBP14.5□□□□□ -0.09
AP002004.1-206ENST00000532441 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
AP002004.1-206ENST00000532441 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
AP002004.1-206ENST00000532441 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
AP002004.1-206ENST00000532441 SCRIBQ14160 1630 aa14.38□□□□□ -0.11
AP002004.1-206ENST00000532441 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
AP002004.1-206ENST00000532441 CC2D2AQ9P2K1 1620 aa14.3□□□□□ -0.12
AP002004.1-206ENST00000532441 SHROOM4Q9ULL8 1493 aa14.27□□□□□ -0.12
AP002004.1-206ENST00000532441 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
AP002004.1-206ENST00000532441 EIF4G1Q04637 1599 aaKnown RBP14.22□□□□□ -0.13
AP002004.1-206ENST00000532441 MAPK8IP2Q13387 824 aaPredicted RBP14.21□□□□□ -0.13
AP002004.1-206ENST00000532441 ZBTB22O15209 634 aa14.05□□□□□ -0.16
AP002004.1-206ENST00000532441 RNF216Q9NWF9 866 aaPredicted RBP14.03□□□□□ -0.16
AP002004.1-206ENST00000532441 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
AP002004.1-206ENST00000532441 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
AP002004.1-206ENST00000532441 HOXD11P31277 338 aaPredicted RBP13.83□□□□□ -0.2
AP002004.1-206ENST00000532441 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
AP002004.1-206ENST00000532441 NCAPD3P42695 1498 aa13.69□□□□□ -0.22
AP002004.1-206ENST00000532441 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
AP002004.1-206ENST00000532441 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
AP002004.1-206ENST00000532441 ERCC6Q03468 1493 aa13.66□□□□□ -0.22
AP002004.1-206ENST00000532441 SMARCA2P51531 1590 aa13.62□□□□□ -0.23
AP002004.1-206ENST00000532441 CUX2O14529 1486 aa13.61□□□□□ -0.23
AP002004.1-206ENST00000532441 NESP48681 1621 aa13.61□□□□□ -0.23
AP002004.1-206ENST00000532441 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
AP002004.1-206ENST00000532441 SLC4A2P04920 1241 aa13.6□□□□□ -0.23
AP002004.1-206ENST00000532441 BAZ1AQ9NRL2 1556 aaPredicted RBP13.56□□□□□ -0.24
AP002004.1-206ENST00000532441 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
AP002004.1-206ENST00000532441 MROH2BQ7Z745 1585 aa13.5□□□□□ -0.25
AP002004.1-206ENST00000532441 PEG3Q9GZU2 1588 aa13.49□□□□□ -0.25
AP002004.1-206ENST00000532441 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
AP002004.1-206ENST00000532441 KIF21AQ7Z4S6 1674 aa13.45□□□□□ -0.26
AP002004.1-206ENST00000532441 LAMC3Q9Y6N6 1575 aa13.43□□□□□ -0.26
AP002004.1-206ENST00000532441 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
AP002004.1-206ENST00000532441 WIZO95785 1651 aa13.37□□□□□ -0.27
AP002004.1-206ENST00000532441 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
AP002004.1-206ENST00000532441 PDS5BQ9NTI5 1447 aa13.33□□□□□ -0.28
AP002004.1-206ENST00000532441 CADPSQ9ULU8 1353 aa13.29□□□□□ -0.28
AP002004.1-206ENST00000532441 DCAF8L1A6NGE4 600 aa13.28□□□□□ -0.28
AP002004.1-206ENST00000532441 MRC2Q9UBG0 1479 aa13.25□□□□□ -0.29
AP002004.1-206ENST00000532441 WDR62O43379 1518 aa13.22□□□□□ -0.29
AP002004.1-206ENST00000532441 CEP164Q9UPV0 1460 aa13.18□□□□□ -0.3
AP002004.1-206ENST00000532441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.18□□□□□ -0.3
AP002004.1-206ENST00000532441 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
AP002004.1-206ENST00000532441 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
AP002004.1-206ENST00000532441 RSF1Q96T23 1441 aaPredicted RBP13.15□□□□□ -0.3
AP002004.1-206ENST00000532441 TOP2AP11388 1531 aaKnown RBP13.13□□□□□ -0.31
AP002004.1-206ENST00000532441 POTEDQ86YR6 584 aa13.13□□□□□ -0.31
AP002004.1-206ENST00000532441 CFTRP13569 1480 aa13.12□□□□□ -0.31
AP002004.1-206ENST00000532441 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.31
AP002004.1-206ENST00000532441 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
AP002004.1-206ENST00000532441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
AP002004.1-206ENST00000532441 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
AP002004.1-206ENST00000532441 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
AP002004.1-206ENST00000532441 ATF5Q9Y2D1 282 aaPredicted RBP13.03□□□□□ -0.32
AP002004.1-206ENST00000532441 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
AP002004.1-206ENST00000532441 FKBP8Q14318 412 aa13.01□□□□□ -0.33
AP002004.1-206ENST00000532441 CCDC88BA6NC98 1476 aa13□□□□□ -0.33
AP002004.1-206ENST00000532441 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
AP002004.1-206ENST00000532441 ZNF608Q9ULD9 1512 aaPredicted RBP12.95□□□□□ -0.34
AP002004.1-206ENST00000532441 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
AP002004.1-206ENST00000532441 IFT140Q96RY7 1462 aa12.91□□□□□ -0.34
AP002004.1-206ENST00000532441 RIMBP3CA6NJZ7 1639 aa12.9□□□□□ -0.34
AP002004.1-206ENST00000532441 RIMBP3BA6NNM3 1639 aa12.9□□□□□ -0.34
AP002004.1-206ENST00000532441 RIMBP3Q9UFD9 1639 aa12.9□□□□□ -0.34
AP002004.1-206ENST00000532441 EIF4G3O43432 1585 aaKnown RBP12.87□□□□□ -0.35
AP002004.1-206ENST00000532441 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
AP002004.1-206ENST00000532441 CHD1O14646 1710 aa12.85□□□□□ -0.35
AP002004.1-206ENST00000532441 ABCC8Q09428 1581 aa12.82□□□□□ -0.36
AP002004.1-206ENST00000532441 TARBP1Q13395 1621 aaKnown RBP12.82□□□□□ -0.36
AP002004.1-206ENST00000532441 AMER1Q5JTC6 1135 aaPredicted RBP12.82□□□□□ -0.36
AP002004.1-206ENST00000532441 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.36
AP002004.1-206ENST00000532441 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms