RNA–Protein interactions for RNA: ENST00000359513.8

ATG13-201, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 4,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-201ENST00000359513 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
ATG13-201ENST00000359513 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
ATG13-201ENST00000359513 SHROOM4Q9ULL8 1493 aa14.8□□□□□ -0.04
ATG13-201ENST00000359513 SUPT5HO00267 1087 aaKnown RBP14.77□□□□□ -0.04
ATG13-201ENST00000359513 EHMT2Q96KQ7 1210 aa14.08□□□□□ -0.16
ATG13-201ENST00000359513 ABCC9O60706 1549 aa13.91□□□□□ -0.18
ATG13-201ENST00000359513 FAM9AQ8IZU1 332 aaPredicted RBP13.87□□□□□ -0.19
ATG13-201ENST00000359513 TRIM41Q8WV44 630 aa13.71□□□□□ -0.22
ATG13-201ENST00000359513 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
ATG13-201ENST00000359513 APLP2Q06481 763 aa13.59□□□□□ -0.23
ATG13-201ENST00000359513 RANGAP1P46060 587 aaPredicted RBP13.58□□□□□ -0.23
ATG13-201ENST00000359513 TTBK1Q5TCY1 1321 aaPredicted RBP13.5□□□□□ -0.25
ATG13-201ENST00000359513 HRCP23327 699 aa13.48□□□□□ -0.25
ATG13-201ENST00000359513 UBTFP17480 764 aaKnown RBP13.46□□□□□ -0.26
ATG13-201ENST00000359513 ATP1B4Q9UN42 357 aaPredicted RBP13.38□□□□□ -0.27
ATG13-201ENST00000359513 CHIC1Q5VXU3 224 aa13.3□□□□□ -0.28
ATG13-201ENST00000359513 PCGF6Q9BYE7 350 aa13.29□□□□□ -0.28
ATG13-201ENST00000359513 CCDC180Q9P1Z9 1646 aa13.27□□□□□ -0.28
ATG13-201ENST00000359513 ZCCHC6Q5VYS8 1495 aaKnown RBP13.27□□□□□ -0.28
ATG13-201ENST00000359513 MYO15BQ96JP2 1530 aa13.2□□□□□ -0.3
ATG13-201ENST00000359513 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
ATG13-201ENST00000359513 PPARGC1BQ86YN6 1023 aaKnown RBP13.17□□□□□ -0.3
ATG13-201ENST00000359513 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
ATG13-201ENST00000359513 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
ATG13-201ENST00000359513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
ATG13-201ENST00000359513 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
ATG13-201ENST00000359513 DCAF1Q9Y4B6 1507 aa13.01□□□□□ -0.33
ATG13-201ENST00000359513 CCER1Q8TC90 406 aaPredicted RBP13□□□□□ -0.33
ATG13-201ENST00000359513 RB1CC1Q8TDY2 1594 aa12.98□□□□□ -0.33
ATG13-201ENST00000359513 ITGAEP38570 1179 aa12.91□□□□□ -0.34
ATG13-201ENST00000359513 NACADO15069 1562 aa12.9□□□□□ -0.34
ATG13-201ENST00000359513 FBLN2P98095 1184 aa12.89□□□□□ -0.35
ATG13-201ENST00000359513 TRIM26Q12899 539 aaPredicted RBP12.85□□□□□ -0.35
ATG13-201ENST00000359513 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
ATG13-201ENST00000359513 ZEB1P37275 1124 aaPredicted RBP12.81□□□□□ -0.36
ATG13-201ENST00000359513 CSRNP3Q8WYN3 585 aa12.8□□□□□ -0.36
ATG13-201ENST00000359513 RSF1Q96T23 1441 aaPredicted RBP12.75□□□□□ -0.37
ATG13-201ENST00000359513 SCAF1Q9H7N4 1312 aaKnown RBP12.73□□□□□ -0.37
ATG13-201ENST00000359513 P3H3Q8IVL6 736 aa12.72□□□□□ -0.37
ATG13-201ENST00000359513 CECR2Q9BXF3 1484 aa12.66□□□□□ -0.38
ATG13-201ENST00000359513 FAM50AQ14320 339 aaKnown RBP12.65□□□□□ -0.38
ATG13-201ENST00000359513 ARID3CA6NKF2 412 aa12.64□□□□□ -0.39
ATG13-201ENST00000359513 BAZ1BQ9UIG0 1483 aaKnown RBP12.6□□□□□ -0.39
ATG13-201ENST00000359513 MYT1Q01538 1121 aa12.55□□□□□ -0.4
ATG13-201ENST00000359513 BAZ1AQ9NRL2 1556 aaPredicted RBP12.54□□□□□ -0.4
ATG13-201ENST00000359513 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
ATG13-201ENST00000359513 POLR3GLQ9BT43 218 aa12.48□□□□□ -0.41
ATG13-201ENST00000359513 CHMP7Q8WUX9 453 aaPredicted RBP12.48□□□□□ -0.41
ATG13-201ENST00000359513 MROH2BQ7Z745 1585 aa12.45□□□□□ -0.42
ATG13-201ENST00000359513 WRNQ14191 1432 aaPredicted RBP eCLIP12.44□□□□□ -0.42
ATG13-201ENST00000359513 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
ATG13-201ENST00000359513 CDK11AQ9UQ88 783 aaPredicted RBP12.43□□□□□ -0.42
ATG13-201ENST00000359513 ACIN1Q9UKV3 1341 aaKnown RBP12.42□□□□□ -0.42
ATG13-201ENST00000359513 CENPBP07199 599 aaPredicted RBP12.4□□□□□ -0.42
ATG13-201ENST00000359513 NEUROD1Q13562 356 aa12.4□□□□□ -0.43
ATG13-201ENST00000359513 YTHDC1Q96MU7 727 aaKnown RBP12.4□□□□□ -0.43
ATG13-201ENST00000359513 CNGB1Q14028 1251 aaPredicted RBP12.38□□□□□ -0.43
ATG13-201ENST00000359513 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
ATG13-201ENST00000359513 ERCC6Q03468 1493 aa12.35□□□□□ -0.43
ATG13-201ENST00000359513 CCDC88BA6NC98 1476 aa12.32□□□□□ -0.44
ATG13-201ENST00000359513 KIF27Q86VH2 1401 aa12.3□□□□□ -0.44
ATG13-201ENST00000359513 ZNF326Q5BKZ1 582 aaKnown RBP12.29□□□□□ -0.44
ATG13-201ENST00000359513 SMARCA2P51531 1590 aa12.29□□□□□ -0.44
ATG13-201ENST00000359513 CLIP1P30622 1438 aa12.29□□□□□ -0.44
ATG13-201ENST00000359513 EEA1Q15075 1411 aa12.28□□□□□ -0.44
ATG13-201ENST00000359513 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
ATG13-201ENST00000359513 GTF3C3Q9Y5Q9 886 aa12.24□□□□□ -0.45
ATG13-201ENST00000359513 ATAD2BQ9ULI0 1458 aa12.24□□□□□ -0.45
ATG13-201ENST00000359513 CHIC2Q9UKJ5 165 aa12.23□□□□□ -0.45
ATG13-201ENST00000359513 WIZO95785 1651 aa12.23□□□□□ -0.45
ATG13-201ENST00000359513 MTUS2Q5JR59 1369 aa12.22□□□□□ -0.45
ATG13-201ENST00000359513 GOLGA3Q08378 1498 aa12.21□□□□□ -0.45
ATG13-201ENST00000359513 KCNH8Q96L42 1107 aa12.21□□□□□ -0.46
ATG13-201ENST00000359513 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
ATG13-201ENST00000359513 SOGA1O94964 1423 aa12.2□□□□□ -0.46
ATG13-201ENST00000359513 CADPSQ9ULU8 1353 aa12.19□□□□□ -0.46
ATG13-201ENST00000359513 CUX2O14529 1486 aa12.19□□□□□ -0.46
ATG13-201ENST00000359513 CEP162Q5TB80 1403 aa12.18□□□□□ -0.46
ATG13-201ENST00000359513 NEFLP07196 543 aa12.18□□□□□ -0.46
ATG13-201ENST00000359513 CARMIL1Q5VZK9 1371 aa12.17□□□□□ -0.46
ATG13-201ENST00000359513 PLEKHD1A6NEE1 506 aa12.17□□□□□ -0.46
ATG13-201ENST00000359513 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
ATG13-201ENST00000359513 TSPY4P0CV99 314 aa12.16□□□□□ -0.46
ATG13-201ENST00000359513 TSPY10P0CW01 314 aa12.16□□□□□ -0.46
ATG13-201ENST00000359513 DIEXFQ68CQ4 756 aaKnown RBP12.15□□□□□ -0.46
ATG13-201ENST00000359513 ABCC8Q09428 1581 aa12.15□□□□□ -0.46
ATG13-201ENST00000359513 CEP164Q9UPV0 1460 aa12.15□□□□□ -0.46
ATG13-201ENST00000359513 TOP2AP11388 1531 aaKnown RBP12.15□□□□□ -0.46
ATG13-201ENST00000359513 TNIKQ9UKE5 1360 aa12.15□□□□□ -0.46
ATG13-201ENST00000359513 ESF1Q9H501 851 aaKnown RBP12.14□□□□□ -0.47
ATG13-201ENST00000359513 SMARCA4P51532 1647 aa12.14□□□□□ -0.47
ATG13-201ENST00000359513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.13□□□□□ -0.47
ATG13-201ENST00000359513 BCANQ96GW7 911 aa12.12□□□□□ -0.47
ATG13-201ENST00000359513 PLPPR3Q6T4P5 718 aa12.12□□□□□ -0.47
ATG13-201ENST00000359513 CHGAP10645 457 aaKnown RBP12.1□□□□□ -0.47
ATG13-201ENST00000359513 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
ATG13-201ENST00000359513 RRP7BPQ9NSQ0 103 aa12.07□□□□□ -0.48
ATG13-201ENST00000359513 CFDP1Q9UEE9 299 aaPredicted RBP12.05□□□□□ -0.48
ATG13-201ENST00000359513 STAG3Q9UJ98 1225 aa12.04□□□□□ -0.48
ATG13-201ENST00000359513 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms