Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SLC43A3-210ENST00000528187 648 ntTSL 514.83□□□□□ -0.034e-8■□□□□ 10.3
PRPF8Q6P2Q9 SLC43A3-223ENST00000533235 581 ntTSL 512.49□□□□□ -0.414e-8■□□□□ 10.3
PRPF8Q6P2Q9 STRADB-204ENST00000447698 576 ntTSL 419.91■□□□□ 0.786e-7■□□□□ 10.3
PRPF8Q6P2Q9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.056e-7■□□□□ 10.3
PRPF8Q6P2Q9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.42□□□□□ -0.16e-7■□□□□ 10.3
PRPF8Q6P2Q9 STRADB-205ENST00000458269 772 ntTSL 56.76□□□□□ -1.336e-7■□□□□ 10.3
PRPF8Q6P2Q9 SLC22A31-202ENST00000562916 692 ntTSL 518.16■□□□□ 0.53e-12■□□□□ 10.3
PRPF8Q6P2Q9 HDAC5-206ENST00000587776 917 ntTSL 313.27□□□□□ -0.292e-6■□□□□ 10.3
PRPF8Q6P2Q9 HDAC5-207ENST00000588261 846 ntTSL 312.77□□□□□ -0.362e-6■□□□□ 10.3
PRPF8Q6P2Q9 SPIRE2-209ENST00000566337 1369 ntTSL 519.19■□□□□ 0.665e-8■□□□□ 10.3
PRPF8Q6P2Q9 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.554e-8■□□□□ 10.3
PRPF8Q6P2Q9 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.864e-8■□□□□ 10.3
PRPF8Q6P2Q9 WDR66-209ENST00000546044 528 ntTSL 34.94□□□□□ -1.624e-8■□□□□ 10.3
PRPF8Q6P2Q9 ZFAND2B-210ENST00000425849 484 ntTSL 311.95□□□□□ -0.53e-9■□□□□ 10.3
PRPF8Q6P2Q9 ENOSF1-213ENST00000581928 443 ntTSL 212.38□□□□□ -0.434e-8■□□□□ 10.3
PRPF8Q6P2Q9 ENOSF1-216ENST00000583973 2057 ntTSL 57.56□□□□□ -1.24e-8■□□□□ 10.3
PRPF8Q6P2Q9 ENOSF1-214ENST00000582745 1096 ntTSL 26.76□□□□□ -1.334e-8■□□□□ 10.3
PRPF8Q6P2Q9 KMT5C-208ENST00000498738 713 ntTSL 518.78■□□□□ 0.64e-9■□□□□ 10.3
PRPF8Q6P2Q9 WDR60-205ENST00000467220 5410 ntTSL 210.09□□□□□ -0.792e-6■□□□□ 10.3
PRPF8Q6P2Q9 WDR60-203ENST00000444851 2769 ntTSL 1 (best)10.04□□□□□ -0.82e-6■□□□□ 10.3
PRPF8Q6P2Q9 DNM2-215ENST00000590806 5651 ntTSL 211.26□□□□□ -0.613e-10■□□□□ 10.2
PRPF8Q6P2Q9 MSH6-203ENST00000420813 491 ntTSL 415.15■□□□□ 0.026e-7■□□□□ 10.2
PRPF8Q6P2Q9 MLXIPL-210ENST00000476404 1921 ntTSL 212.95□□□□□ -0.344e-20■□□□□ 10.2
PRPF8Q6P2Q9 SRRM2-228ENST00000576878 1141 ntTSL 214.67□□□□□ -0.061e-28■□□□□ 10.2
PRPF8Q6P2Q9 SRRM2-204ENST00000570705 675 ntTSL 312.66□□□□□ -0.381e-28■□□□□ 10.2
PRPF8Q6P2Q9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.48□□□□□ -0.092e-6■□□□□ 10.2
PRPF8Q6P2Q9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.192e-6■□□□□ 10.2
PRPF8Q6P2Q9 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.562e-6■□□□□ 10.2
PRPF8Q6P2Q9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.515e-7■□□□□ 10.2
PRPF8Q6P2Q9 IMPA2-211ENST00000590138 895 ntTSL 517.68■□□□□ 0.425e-7■□□□□ 10.2
PRPF8Q6P2Q9 IMPA2-210ENST00000590107 1616 ntTSL 517.3■□□□□ 0.365e-7■□□□□ 10.2
PRPF8Q6P2Q9 IMPA2-205ENST00000588752 651 ntTSL 317.08■□□□□ 0.335e-7■□□□□ 10.2
PRPF8Q6P2Q9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.87■□□□□ 0.295e-7■□□□□ 10.2
PRPF8Q6P2Q9 IMPA2-202ENST00000383376 1575 ntTSL 1 (best)16.73■□□□□ 0.275e-7■□□□□ 10.2
PRPF8Q6P2Q9 IMPA2-204ENST00000588167 885 ntTSL 215.51■□□□□ 0.075e-7■□□□□ 10.2
PRPF8Q6P2Q9 IMPA2-203ENST00000586230 563 ntTSL 212.27□□□□□ -0.455e-7■□□□□ 10.2
PRPF8Q6P2Q9 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.1□□□□□ -0.475e-7■□□□□ 10.2
PRPF8Q6P2Q9 FN1-210ENST00000438981 723 ntTSL 26.94□□□□□ -1.36e-16■□□□□ 10.2
PRPF8Q6P2Q9 MTG2-205ENST00000466933 667 ntTSL 310.8□□□□□ -0.683e-13■□□□□ 10.2
PRPF8Q6P2Q9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.055e-8■□□□□ 10.2
PRPF8Q6P2Q9 CTSD-205ENST00000438213 946 ntTSL 213.77□□□□□ -0.213e-10■□□□□ 10.2
PRPF8Q6P2Q9 CTSD-202ENST00000367196 907 ntTSL 512.86□□□□□ -0.353e-10■□□□□ 10.2
PRPF8Q6P2Q9 CTSD-210ENST00000637381 374 ntTSL 510.98□□□□□ -0.653e-10■□□□□ 10.2
PRPF8Q6P2Q9 TNFSF14-201ENST00000245912 4336 ntTSL 1 (best) BASIC9.14□□□□□ -0.955e-8■□□□□ 10.2
PRPF8Q6P2Q9 MLXIPL-211ENST00000488212 534 ntTSL 28.6□□□□□ -1.031e-30■□□□□ 10.2
PRPF8Q6P2Q9 CIZ1-214ENST00000474442 457 ntTSL 46.47□□□□□ -1.373e-9■□□□□ 10.2
PRPF8Q6P2Q9 BSDC1-207ENST00000463967 616 ntTSL 311.57□□□□□ -0.563e-13■□□□□ 10.2
PRPF8Q6P2Q9 GSDMD-214ENST00000533888 576 ntTSL 413.73□□□□□ -0.212e-7■□□□□ 10.2
PRPF8Q6P2Q9 AMBRA1-204ENST00000526545 837 ntTSL 39.48□□□□□ -0.892e-6■□□□□ 10.2
PRPF8Q6P2Q9 LRP5-207ENST00000533695 267 ntTSL 315.28■□□□□ 0.049e-8■□□□□ 10.2
PRPF8Q6P2Q9 MYH9-209ENST00000477189 572 ntTSL 211.55□□□□□ -0.563e-7■□□□□ 10.2
PRPF8Q6P2Q9 IMPA2-206ENST00000588863 391 ntTSL 27.11□□□□□ -1.272e-15■□□□□ 10.2
PRPF8Q6P2Q9 TMEM167A-204ENST00000509770 492 ntTSL 413.66□□□□□ -0.223e-12■□□□□ 10.2
PRPF8Q6P2Q9 TMEM167A-203ENST00000504622 596 ntTSL 210.47□□□□□ -0.733e-12■□□□□ 10.2
PRPF8Q6P2Q9 LMBR1L-213ENST00000549730 585 ntTSL 58.47□□□□□ -1.053e-12■□□□□ 10.2
PRPF8Q6P2Q9 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.153e-12■□□□□ 10.2
PRPF8Q6P2Q9 TMEM167A-206ENST00000511450 3353 ntTSL 54.89□□□□□ -1.633e-12■□□□□ 10.2
PRPF8Q6P2Q9 TMEM167A-202ENST00000503892 562 ntTSL 44.63□□□□□ -1.673e-12■□□□□ 10.2
PRPF8Q6P2Q9 NCOR2-206ENST00000418829 563 ntTSL 312.46□□□□□ -0.418e-7■□□□□ 10.2
PRPF8Q6P2Q9 PRR3-205ENST00000491173 391 ntTSL 311.08□□□□□ -0.648e-7■□□□□ 10.2
PRPF8Q6P2Q9 PILRB-205ENST00000438231 603 ntTSL 310.01□□□□□ -0.815e-9■□□□□ 10.2
PRPF8Q6P2Q9 PILRB-212ENST00000608825 587 ntAPPRIS ALT2 TSL 39.58□□□□□ -0.885e-9■□□□□ 10.2
PRPF8Q6P2Q9 SH3TC1-216ENST00000508641 551 ntTSL 412.36□□□□□ -0.433e-6■□□□□ 10.2
PRPF8Q6P2Q9 UBA3-206ENST00000464605 431 ntTSL 219.03■□□□□ 0.642e-6■□□□□ 10.2
PRPF8Q6P2Q9 UBA3-210ENST00000485424 652 ntTSL 211.74□□□□□ -0.532e-6■□□□□ 10.2
PRPF8Q6P2Q9 UBA3-209ENST00000466763 622 ntTSL 211.61□□□□□ -0.552e-6■□□□□ 10.2
PRPF8Q6P2Q9 UBA3-211ENST00000493957 581 ntTSL 39.94□□□□□ -0.822e-6■□□□□ 10.2
PRPF8Q6P2Q9 ARRB2-220ENST00000577054 579 ntTSL 312.15□□□□□ -0.463e-6■□□□□ 10.2
PRPF8Q6P2Q9 ACSM3-212ENST00000567711 438 ntTSL 3-0.82□□□□□ -2.544e-9■□□□□ 10.2
PRPF8Q6P2Q9 ACSM3-210ENST00000567006 520 ntTSL 2-1.06□□□□□ -2.584e-9■□□□□ 10.2
PRPF8Q6P2Q9 LCAT-209ENST00000576450 359 ntTSL 210.22□□□□□ -0.778e-24■□□□□ 10.2
PRPF8Q6P2Q9 PKN1-209ENST00000587215 363 ntTSL 314.16□□□□□ -0.145e-8■□□□□ 10.2
PRPF8Q6P2Q9 PKN1-208ENST00000586900 550 ntTSL 310.31□□□□□ -0.765e-8■□□□□ 10.2
PRPF8Q6P2Q9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.731e-7■□□□□ 10.2
PRPF8Q6P2Q9 LYL1-203ENST00000590974 902 ntTSL 318.77■□□□□ 0.61e-7■□□□□ 10.2
PRPF8Q6P2Q9 LYL1-202ENST00000590120 1547 nt15.82■□□□□ 0.121e-7■□□□□ 10.2
PRPF8Q6P2Q9 ZNF330-208ENST00000515453 558 ntTSL 411.4□□□□□ -0.592e-7■□□□□ 10.2
PRPF8Q6P2Q9 ZNF330-203ENST00000506302 1180 ntTSL 210.69□□□□□ -0.72e-7■□□□□ 10.2
PRPF8Q6P2Q9 ZNF330-207ENST00000514826 733 ntTSL 29.98□□□□□ -0.812e-7■□□□□ 10.2
PRPF8Q6P2Q9 ZNF330-204ENST00000507532 836 ntTSL 39.66□□□□□ -0.862e-7■□□□□ 10.2
PRPF8Q6P2Q9 ZNF330-201ENST00000262990 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.942e-7■□□□□ 10.2
PRPF8Q6P2Q9 ZNF330-206ENST00000512809 838 ntTSL 38.92□□□□□ -0.982e-7■□□□□ 10.2
PRPF8Q6P2Q9 ZNF330-205ENST00000512738 552 ntTSL 48.9□□□□□ -0.982e-7■□□□□ 10.2
PRPF8Q6P2Q9 ZNF330-202ENST00000503649 573 ntTSL 54.01□□□□□ -1.772e-7■□□□□ 10.2
PRPF8Q6P2Q9 ACSS3-204ENST00000548324 2214 ntTSL 26.04□□□□□ -1.445e-9■□□□□ 10.2
PRPF8Q6P2Q9 RNU4-2-201ENST00000365668 141 ntBASIC4.48□□□□□ -1.691e-323■□□□□ 10.2
PRPF8Q6P2Q9 ARID1B-216ENST00000636426 1489 ntTSL 58.85□□□□□ -0.993e-7■□□□□ 10.2
PRPF8Q6P2Q9 PLSCR3-206ENST00000573070 1740 ntTSL 522.25■■□□□ 1.151e-6■□□□□ 10.2
PRPF8Q6P2Q9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.711e-6■□□□□ 10.2
PRPF8Q6P2Q9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.631e-6■□□□□ 10.2
PRPF8Q6P2Q9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.73■□□□□ 0.591e-6■□□□□ 10.2
PRPF8Q6P2Q9 PLSCR3-207ENST00000573213 581 ntTSL 317.77■□□□□ 0.441e-6■□□□□ 10.2
PRPF8Q6P2Q9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.311e-6■□□□□ 10.2
PRPF8Q6P2Q9 PLSCR3-205ENST00000571802 583 ntTSL 316.71■□□□□ 0.271e-6■□□□□ 10.2
PRPF8Q6P2Q9 PLSCR3-208ENST00000573774 2056 ntTSL 215.27■□□□□ 0.031e-6■□□□□ 10.2
PRPF8Q6P2Q9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.031e-6■□□□□ 10.2
PRPF8Q6P2Q9 PLSCR3-204ENST00000571541 2310 ntTSL 214.28□□□□□ -0.121e-6■□□□□ 10.2
PRPF8Q6P2Q9 PLSCR3-211ENST00000575543 1672 ntTSL 211.04□□□□□ -0.641e-6■□□□□ 10.2
PRPF8Q6P2Q9 ECHDC2-225ENST00000544365 1335 ntTSL 517.22■□□□□ 0.351e-8■□□□□ 10.2
PRPF8Q6P2Q9 ECHDC2-219ENST00000495920 456 ntTSL 316.63■□□□□ 0.251e-8■□□□□ 10.2
Retrieved 100 of 73,762 protein–RNA pairs in 600.3 ms