RNA–Protein interactions for RNA: ENST00000567711.1

ACSM3-212, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 3

Gene ACSM3, Length 438 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-212ENST00000567711 AEBP2Q6ZN18 517 aaPredicted RBP27.24■■□□□ 1.95
ACSM3-212ENST00000567711 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
ACSM3-212ENST00000567711 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
ACSM3-212ENST00000567711 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
ACSM3-212ENST00000567711 FOXD1Q16676 465 aa21.61■■□□□ 1.05
ACSM3-212ENST00000567711 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
ACSM3-212ENST00000567711 PPP6R1Q9UPN7 881 aa20.36■□□□□ 0.85
ACSM3-212ENST00000567711 ADRA2BP18089 450 aa20.32■□□□□ 0.84
ACSM3-212ENST00000567711 PIAS4Q8N2W9 510 aaPredicted RBP20.26■□□□□ 0.83
ACSM3-212ENST00000567711 MSH5O43196 834 aa20.16■□□□□ 0.82
ACSM3-212ENST00000567711 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
ACSM3-212ENST00000567711 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
ACSM3-212ENST00000567711 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
ACSM3-212ENST00000567711 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
ACSM3-212ENST00000567711 PPP4R3CPQ6ZMV5 832 aa18.37■□□□□ 0.53
ACSM3-212ENST00000567711 CNKSR2Q8WXI2 1034 aa17.98■□□□□ 0.47
ACSM3-212ENST00000567711 HOXD11P31277 338 aaPredicted RBP17.83■□□□□ 0.44
ACSM3-212ENST00000567711 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
ACSM3-212ENST00000567711 NCBP3Q53F19 620 aaKnown RBP17.74■□□□□ 0.43
ACSM3-212ENST00000567711 DCAF8L1A6NGE4 600 aa17.73■□□□□ 0.43
ACSM3-212ENST00000567711 NPM3O75607 178 aaKnown RBP17.45■□□□□ 0.38
ACSM3-212ENST00000567711 KCNA4P22459 653 aa17.3■□□□□ 0.36
ACSM3-212ENST00000567711 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
ACSM3-212ENST00000567711 RNF39Q9H2S5 420 aa17.22■□□□□ 0.35
ACSM3-212ENST00000567711 DNAJC5BQ9UF47 199 aa17.16■□□□□ 0.34
ACSM3-212ENST00000567711 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
ACSM3-212ENST00000567711 C1QBPQ07021 282 aaKnown RBP16.98■□□□□ 0.31
ACSM3-212ENST00000567711 U3KPZ7 1027 aaPredicted RBP16.66■□□□□ 0.26
ACSM3-212ENST00000567711 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
ACSM3-212ENST00000567711 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
ACSM3-212ENST00000567711 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
ACSM3-212ENST00000567711 CAPN15O75808 1086 aa16.36■□□□□ 0.21
ACSM3-212ENST00000567711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
ACSM3-212ENST00000567711 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
ACSM3-212ENST00000567711 APLP2Q06481 763 aa16.24■□□□□ 0.19
ACSM3-212ENST00000567711 DSG3P32926 999 aa16.19■□□□□ 0.18
ACSM3-212ENST00000567711 SAMD1Q6SPF0 538 aaPredicted RBP16.19■□□□□ 0.18
ACSM3-212ENST00000567711 MYCNP04198 464 aaPredicted RBP16.15■□□□□ 0.18
ACSM3-212ENST00000567711 TRHP20396 242 aaPredicted RBP16.15■□□□□ 0.18
ACSM3-212ENST00000567711 ZNF219Q9P2Y4 722 aaPredicted RBP16.11■□□□□ 0.17
ACSM3-212ENST00000567711 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.16
ACSM3-212ENST00000567711 ABCB7O75027 752 aa15.99■□□□□ 0.15
ACSM3-212ENST00000567711 ZBTB22O15209 634 aa15.89■□□□□ 0.13
ACSM3-212ENST00000567711 ATF5Q9Y2D1 282 aaPredicted RBP15.76■□□□□ 0.11
ACSM3-212ENST00000567711 POLA2Q14181 598 aa15.74■□□□□ 0.11
ACSM3-212ENST00000567711 ATXN8OSP0DMR3 200 aa15.57■□□□□ 0.08
ACSM3-212ENST00000567711 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
ACSM3-212ENST00000567711 ZBTB12Q9Y330 459 aaPredicted RBP15.43■□□□□ 0.06
ACSM3-212ENST00000567711 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
ACSM3-212ENST00000567711 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
ACSM3-212ENST00000567711 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
ACSM3-212ENST00000567711 POTEHQ6S545 545 aa15.21■□□□□ 0.03
ACSM3-212ENST00000567711 FBLN2P98095 1184 aa15.16■□□□□ 0.02
ACSM3-212ENST00000567711 AKT1S1Q96B36 256 aa15.14■□□□□ 0.01
ACSM3-212ENST00000567711 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
ACSM3-212ENST00000567711 MKRN4PQ13434 485 aaPredicted RBP15.03■□□□□ -0
ACSM3-212ENST00000567711 REM2Q8IYK8 340 aaPredicted RBP15□□□□□ -0.01
ACSM3-212ENST00000567711 SPDYE2BA6NHP3 402 aa14.97□□□□□ -0.01
ACSM3-212ENST00000567711 SPDYE6P0CI01 402 aa14.97□□□□□ -0.01
ACSM3-212ENST00000567711 SPDYE2Q495Y8 402 aa14.97□□□□□ -0.01
ACSM3-212ENST00000567711 ZNF692Q9BU19 519 aaPredicted RBP14.84□□□□□ -0.03
ACSM3-212ENST00000567711 PITPNM1O00562 1244 aa14.82□□□□□ -0.04
ACSM3-212ENST00000567711 SSUH2Q9Y2M2 353 aa14.77□□□□□ -0.05
ACSM3-212ENST00000567711 PIP4P2Q8N4L2 257 aa14.72□□□□□ -0.05
ACSM3-212ENST00000567711 SPDYE1Q8NFV5 336 aaPredicted RBP14.67□□□□□ -0.06
ACSM3-212ENST00000567711 FXR2P51116 673 aaKnown RBP eCLIP14.66□□□□□ -0.06
ACSM3-212ENST00000567711 CLEC11AQ9Y240 323 aa14.66□□□□□ -0.06
ACSM3-212ENST00000567711 PABPN1Q86U42 306 aaKnown RBP eCLIP14.62□□□□□ -0.07
ACSM3-212ENST00000567711 PRKAR2AP13861 404 aaKnown RBP14.46□□□□□ -0.09
ACSM3-212ENST00000567711 SPDYE4A6NLX3 237 aa14.44□□□□□ -0.1
ACSM3-212ENST00000567711 PRR29P0C7W0 189 aa14.44□□□□□ -0.1
ACSM3-212ENST00000567711 HAX1O00165 279 aa14.43□□□□□ -0.1
ACSM3-212ENST00000567711 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
ACSM3-212ENST00000567711 CHADLQ6NUI6 762 aa14.34□□□□□ -0.11
ACSM3-212ENST00000567711 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
ACSM3-212ENST00000567711 EVX2Q03828 476 aa14.23□□□□□ -0.13
ACSM3-212ENST00000567711 C19orf67A6NJJ6 358 aa14.18□□□□□ -0.14
ACSM3-212ENST00000567711 FARP1Q9Y4F1 1045 aaPredicted RBP14.14□□□□□ -0.15
ACSM3-212ENST00000567711 CREBZFQ9NS37 354 aa14.1□□□□□ -0.15
ACSM3-212ENST00000567711 PROM2Q8N271 834 aa14.08□□□□□ -0.16
ACSM3-212ENST00000567711 CD44P16070 742 aaKnown RBP14.01□□□□□ -0.17
ACSM3-212ENST00000567711 GABBR2O75899 941 aa13.94□□□□□ -0.18
ACSM3-212ENST00000567711 FKBP8Q14318 412 aa13.92□□□□□ -0.18
ACSM3-212ENST00000567711 NPM1P06748 294 aaKnown RBP eCLIP13.88□□□□□ -0.19
ACSM3-212ENST00000567711 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
ACSM3-212ENST00000567711 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
ACSM3-212ENST00000567711 PAK3O75914 559 aaPredicted RBP13.79□□□□□ -0.2
ACSM3-212ENST00000567711 CLCN6P51797 869 aa13.79□□□□□ -0.2
ACSM3-212ENST00000567711 ZNF579Q8NAF0 562 aaKnown RBP13.79□□□□□ -0.2
ACSM3-212ENST00000567711 MIER1Q8N108 512 aa13.78□□□□□ -0.2
ACSM3-212ENST00000567711 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
ACSM3-212ENST00000567711 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
ACSM3-212ENST00000567711 PHF12Q96QT6 1004 aa13.67□□□□□ -0.22
ACSM3-212ENST00000567711 DCBLD2Q96PD2 775 aa13.63□□□□□ -0.23
ACSM3-212ENST00000567711 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
ACSM3-212ENST00000567711 GALR2O43603 387 aaPredicted RBP13.62□□□□□ -0.23
ACSM3-212ENST00000567711 POTEIP0CG38 1075 aa13.62□□□□□ -0.23
ACSM3-212ENST00000567711 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
ACSM3-212ENST00000567711 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
ACSM3-212ENST00000567711 RASEFQ8IZ41 740 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms