RNA–Protein interactions for RNA: ENST00000365668.1

RNU4-2-201, Transcript of RNA, U4 small nuclear 2, humanhuman

BASIC

Gene RNU4-2, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-2-201ENST00000365668 AEBP2Q6ZN18 517 aaPredicted RBP20.15■□□□□ 0.82
RNU4-2-201ENST00000365668 CHIC1Q5VXU3 224 aa18.83■□□□□ 0.6
RNU4-2-201ENST00000365668 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
RNU4-2-201ENST00000365668 PHF23Q9BUL5 403 aaPredicted RBP16.98■□□□□ 0.31
RNU4-2-201ENST00000365668 FOXD1Q16676 465 aa16.12■□□□□ 0.17
RNU4-2-201ENST00000365668 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
RNU4-2-201ENST00000365668 MSH5O43196 834 aa15.23■□□□□ 0.03
RNU4-2-201ENST00000365668 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
RNU4-2-201ENST00000365668 PLPPR3Q6T4P5 718 aa14.84□□□□□ -0.03
RNU4-2-201ENST00000365668 PPP6R1Q9UPN7 881 aa14.81□□□□□ -0.04
RNU4-2-201ENST00000365668 ADRA2BP18089 450 aa14.73□□□□□ -0.05
RNU4-2-201ENST00000365668 MAPK8IP2Q13387 824 aaPredicted RBP13.65□□□□□ -0.22
RNU4-2-201ENST00000365668 DMRT2Q9Y5R5 561 aa13.62□□□□□ -0.23
RNU4-2-201ENST00000365668 SCAF1Q9H7N4 1312 aaKnown RBP13.49□□□□□ -0.25
RNU4-2-201ENST00000365668 CACNB1Q02641 598 aaPredicted RBP13.3□□□□□ -0.28
RNU4-2-201ENST00000365668 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
RNU4-2-201ENST00000365668 NISCHQ9Y2I1 1504 aa13.03□□□□□ -0.32
RNU4-2-201ENST00000365668 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
RNU4-2-201ENST00000365668 PPP4R3CPQ6ZMV5 832 aa12.97□□□□□ -0.33
RNU4-2-201ENST00000365668 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
RNU4-2-201ENST00000365668 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
RNU4-2-201ENST00000365668 RNF216Q9NWF9 866 aaPredicted RBP12.79□□□□□ -0.36
RNU4-2-201ENST00000365668 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
RNU4-2-201ENST00000365668 DNAJC5BQ9UF47 199 aa12.62□□□□□ -0.39
RNU4-2-201ENST00000365668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.37□□□□□ -0.43
RNU4-2-201ENST00000365668 NCBP3Q53F19 620 aaKnown RBP12.36□□□□□ -0.43
RNU4-2-201ENST00000365668 NPM3O75607 178 aaKnown RBP12.17□□□□□ -0.46
RNU4-2-201ENST00000365668 POTEHQ6S545 545 aa12.06□□□□□ -0.48
RNU4-2-201ENST00000365668 U3KPZ7 1027 aaPredicted RBP12.05□□□□□ -0.48
RNU4-2-201ENST00000365668 DSG3P32926 999 aa12.01□□□□□ -0.49
RNU4-2-201ENST00000365668 CAPN15O75808 1086 aa11.99□□□□□ -0.49
RNU4-2-201ENST00000365668 SPINK5Q9NQ38 1064 aaPredicted RBP11.99□□□□□ -0.49
RNU4-2-201ENST00000365668 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
RNU4-2-201ENST00000365668 TRHP20396 242 aaPredicted RBP11.71□□□□□ -0.53
RNU4-2-201ENST00000365668 APLP2Q06481 763 aa11.69□□□□□ -0.54
RNU4-2-201ENST00000365668 ABCB7O75027 752 aa11.68□□□□□ -0.54
RNU4-2-201ENST00000365668 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
RNU4-2-201ENST00000365668 KCNA4P22459 653 aa11.61□□□□□ -0.55
RNU4-2-201ENST00000365668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.6□□□□□ -0.55
RNU4-2-201ENST00000365668 HNRNPUL2Q1KMD3 747 aaKnown RBP11.6□□□□□ -0.55
RNU4-2-201ENST00000365668 SAMD1Q6SPF0 538 aaPredicted RBP11.51□□□□□ -0.57
RNU4-2-201ENST00000365668 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
RNU4-2-201ENST00000365668 CCDC180Q9P1Z9 1646 aa11.38□□□□□ -0.59
RNU4-2-201ENST00000365668 ABCC9O60706 1549 aa11.38□□□□□ -0.59
RNU4-2-201ENST00000365668 CHRDL2Q6WN34 429 aa11.37□□□□□ -0.59
RNU4-2-201ENST00000365668 POLA2Q14181 598 aa11.33□□□□□ -0.6
RNU4-2-201ENST00000365668 MYCNP04198 464 aaPredicted RBP11.25□□□□□ -0.61
RNU4-2-201ENST00000365668 DCAF8L2P0C7V8 631 aa11.2□□□□□ -0.62
RNU4-2-201ENST00000365668 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
RNU4-2-201ENST00000365668 AKT1S1Q96B36 256 aa11.13□□□□□ -0.63
RNU4-2-201ENST00000365668 ZBTB12Q9Y330 459 aaPredicted RBP11.06□□□□□ -0.64
RNU4-2-201ENST00000365668 ATF5Q9Y2D1 282 aaPredicted RBP11.04□□□□□ -0.64
RNU4-2-201ENST00000365668 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
RNU4-2-201ENST00000365668 PIP4P2Q8N4L2 257 aa11.02□□□□□ -0.65
RNU4-2-201ENST00000365668 OSCARQ8IYS5 282 aa10.95□□□□□ -0.66
RNU4-2-201ENST00000365668 FOXD4L1Q9NU39 408 aa10.94□□□□□ -0.66
RNU4-2-201ENST00000365668 HAX1O00165 279 aa10.93□□□□□ -0.66
RNU4-2-201ENST00000365668 PITPNM1O00562 1244 aa10.91□□□□□ -0.66
RNU4-2-201ENST00000365668 FXR2P51116 673 aaKnown RBP eCLIP10.9□□□□□ -0.66
RNU4-2-201ENST00000365668 NACADO15069 1562 aa10.9□□□□□ -0.67
RNU4-2-201ENST00000365668 SLC4A1APQ9BWU0 796 aaKnown RBP10.89□□□□□ -0.67
RNU4-2-201ENST00000365668 RB1CC1Q8TDY2 1594 aa10.89□□□□□ -0.67
RNU4-2-201ENST00000365668 MYO15BQ96JP2 1530 aa10.85□□□□□ -0.67
RNU4-2-201ENST00000365668 ZCCHC6Q5VYS8 1495 aaKnown RBP10.81□□□□□ -0.68
RNU4-2-201ENST00000365668 DCAF1Q9Y4B6 1507 aa10.78□□□□□ -0.68
RNU4-2-201ENST00000365668 EVX2Q03828 476 aa10.77□□□□□ -0.69
RNU4-2-201ENST00000365668 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
RNU4-2-201ENST00000365668 SPDYE2BA6NHP3 402 aa10.68□□□□□ -0.7
RNU4-2-201ENST00000365668 SPDYE6P0CI01 402 aa10.68□□□□□ -0.7
RNU4-2-201ENST00000365668 SPDYE2Q495Y8 402 aa10.68□□□□□ -0.7
RNU4-2-201ENST00000365668 EHMT2Q96KQ7 1210 aa10.67□□□□□ -0.7
RNU4-2-201ENST00000365668 ZBTB22O15209 634 aa10.66□□□□□ -0.7
RNU4-2-201ENST00000365668 ATXN8OSP0DMR3 200 aa10.66□□□□□ -0.7
RNU4-2-201ENST00000365668 PRKAR2AP13861 404 aaKnown RBP10.63□□□□□ -0.71
RNU4-2-201ENST00000365668 FBLN2P98095 1184 aa10.63□□□□□ -0.71
RNU4-2-201ENST00000365668 SPDYE1Q8NFV5 336 aaPredicted RBP10.59□□□□□ -0.71
RNU4-2-201ENST00000365668 CLEC11AQ9Y240 323 aa10.59□□□□□ -0.71
RNU4-2-201ENST00000365668 C19orf67A6NJJ6 358 aa10.57□□□□□ -0.72
RNU4-2-201ENST00000365668 GABBR2O75899 941 aa10.51□□□□□ -0.73
RNU4-2-201ENST00000365668 MKRN4PQ13434 485 aaPredicted RBP10.51□□□□□ -0.73
RNU4-2-201ENST00000365668 ZNF692Q9BU19 519 aaPredicted RBP10.51□□□□□ -0.73
RNU4-2-201ENST00000365668 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
RNU4-2-201ENST00000365668 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
RNU4-2-201ENST00000365668 SCRIBQ14160 1630 aa10.47□□□□□ -0.73
RNU4-2-201ENST00000365668 LHX8Q68G74 356 aa10.45□□□□□ -0.74
RNU4-2-201ENST00000365668 BICRAQ9NZM4 1560 aa10.43□□□□□ -0.74
RNU4-2-201ENST00000365668 CHADLQ6NUI6 762 aa10.42□□□□□ -0.74
RNU4-2-201ENST00000365668 PRR29P0C7W0 189 aa10.38□□□□□ -0.75
RNU4-2-201ENST00000365668 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
RNU4-2-201ENST00000365668 CECR2Q9BXF3 1484 aa10.26□□□□□ -0.77
RNU4-2-201ENST00000365668 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
RNU4-2-201ENST00000365668 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
RNU4-2-201ENST00000365668 UNC13AQ9UPW8 1703 aa10.24□□□□□ -0.77
RNU4-2-201ENST00000365668 EIF4G1Q04637 1599 aaKnown RBP10.24□□□□□ -0.77
RNU4-2-201ENST00000365668 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
RNU4-2-201ENST00000365668 CLCN6P51797 869 aa10.22□□□□□ -0.77
RNU4-2-201ENST00000365668 CC2D2AQ9P2K1 1620 aa10.17□□□□□ -0.78
RNU4-2-201ENST00000365668 DCBLD2Q96PD2 775 aa10.14□□□□□ -0.79
RNU4-2-201ENST00000365668 NCAPD3P42695 1498 aa10.13□□□□□ -0.79
RNU4-2-201ENST00000365668 ATAD2BQ9ULI0 1458 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms