Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 CDV3P1-201ENST00000471403 739 ntBASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 TERF1P5-201ENST00000477545 1207 ntBASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 AC010536.3-201ENST00000620306 533 ntBASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.54□□□□□ -0.08
HHLA3Q9XRX5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 TCF3P1-201ENST00000423021 1937 ntBASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HHLA3Q9XRX5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.52□□□□□ -0.08
HHLA3Q9XRX5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HHLA3Q9XRX5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HHLA3Q9XRX5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HHLA3Q9XRX5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.52□□□□□ -0.08
HHLA3Q9XRX5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HHLA3Q9XRX5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.52□□□□□ -0.08
HHLA3Q9XRX5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HHLA3Q9XRX5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HHLA3Q9XRX5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HHLA3Q9XRX5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HHLA3Q9XRX5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 AC091799.1-201ENST00000422823 811 ntBASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 AC022517.1-201ENST00000592429 346 ntBASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HHLA3Q9XRX5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms