Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CDC42SE1Q9NRR8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 AL354751.1-201ENST00000412768 1863 ntBASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 Z82202.1-201ENST00000623446 1880 ntBASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 AC063926.3-201ENST00000624734 5658 ntBASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CDC42SE1Q9NRR8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 AP004607.7-201ENST00000527152 1677 ntBASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CDC42SE1Q9NRR8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
CDC42SE1Q9NRR8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CDC42SE1Q9NRR8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CDC42SE1Q9NRR8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CDC42SE1Q9NRR8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
CDC42SE1Q9NRR8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms