Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LIN28AQ9H9Z2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 AC116050.2-201ENST00000612102 1779 ntBASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 NEFHP1-201ENST00000412845 2629 ntBASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 AC010980.2-201ENST00000587099 1412 ntBASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 AC007322.3-201ENST00000426526 701 ntBASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 AL162412.1-201ENST00000567129 965 ntBASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 AC027702.1-201ENST00000563810 1770 ntBASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LIN28AQ9H9Z2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 MIPEPP3-201ENST00000412105 444 ntBASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 BX276092.2-201ENST00000417668 665 ntBASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIN28AQ9H9Z2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 AL512625.2-201ENST00000417533 625 ntBASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 FAM21FP-204ENST00000608637 956 ntBASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LIN28AQ9H9Z2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LIN28AQ9H9Z2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LIN28AQ9H9Z2 AC006128.1-201ENST00000624704 1661 ntBASIC19.08■□□□□ 0.65
LIN28AQ9H9Z2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.65
LIN28AQ9H9Z2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LIN28AQ9H9Z2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LIN28AQ9H9Z2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.08■□□□□ 0.65
LIN28AQ9H9Z2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LIN28AQ9H9Z2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LIN28AQ9H9Z2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LIN28AQ9H9Z2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LIN28AQ9H9Z2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LIN28AQ9H9Z2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIN28AQ9H9Z2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms