Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.03■□□□□ -0
AP1S3Q96PC3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
AP1S3Q96PC3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP1S3Q96PC3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP1S3Q96PC3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP1S3Q96PC3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP1S3Q96PC3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
AP1S3Q96PC3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.02■□□□□ -0
AP1S3Q96PC3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP1S3Q96PC3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.02■□□□□ -0
AP1S3Q96PC3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
AP1S3Q96PC3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.02■□□□□ -0
AP1S3Q96PC3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
AP1S3Q96PC3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP1S3Q96PC3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
AP1S3Q96PC3 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.02■□□□□ -0
AP1S3Q96PC3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
AP1S3Q96PC3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.02■□□□□ -0
AP1S3Q96PC3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP1S3Q96PC3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
AP1S3Q96PC3 GUSBP5-201ENST00000418136 578 ntBASIC15.02■□□□□ -0
AP1S3Q96PC3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP1S3Q96PC3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.02■□□□□ -0
AP1S3Q96PC3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.02■□□□□ -0
AP1S3Q96PC3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.02■□□□□ -0
AP1S3Q96PC3 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.02■□□□□ -0
AP1S3Q96PC3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.02■□□□□ -0
AP1S3Q96PC3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 AC063926.3-201ENST00000624734 5658 ntBASIC15.02□□□□□ -0.01
AP1S3Q96PC3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP1S3Q96PC3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 FP700111.2-201ENST00000619190 1892 ntBASIC15.01□□□□□ -0.01
AP1S3Q96PC3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 AL035685.1-201ENST00000636663 812 ntBASIC15.01□□□□□ -0.01
AP1S3Q96PC3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 LTB4R2-202ENST00000528054 3092 ntBASIC15.01□□□□□ -0.01
AP1S3Q96PC3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.01□□□□□ -0.01
AP1S3Q96PC3 PCDHAC2-203ENST00000615316 3011 ntBASIC15.01□□□□□ -0.01
AP1S3Q96PC3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15□□□□□ -0.01
AP1S3Q96PC3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15□□□□□ -0.01
AP1S3Q96PC3 FZD10-202ENST00000539839 3282 ntBASIC15□□□□□ -0.01
AP1S3Q96PC3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15□□□□□ -0.01
AP1S3Q96PC3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
AP1S3Q96PC3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15□□□□□ -0.01
AP1S3Q96PC3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15□□□□□ -0.01
AP1S3Q96PC3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
AP1S3Q96PC3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
AP1S3Q96PC3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
AP1S3Q96PC3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15□□□□□ -0.01
AP1S3Q96PC3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms