Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 AC019069.1-201ENST00000610008 1333 ntBASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 AC007322.3-201ENST00000426526 701 ntBASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 TNXA-203ENST00000507684 2038 ntBASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DNAAF1Q8NEP3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 AC004408.2-201ENST00000623613 2777 ntBASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 ZNRF2P3-201ENST00000424200 374 ntBASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 AC005332.7-201ENST00000614046 2005 ntBASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.47■□□□□ 0.39
DNAAF1Q8NEP3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DNAAF1Q8NEP3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms