Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.43■□□□□ 0.86
SIX5Q8N196 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.43■□□□□ 0.86
SIX5Q8N196 AK4P3-201ENST00000418260 669 ntBASIC20.43■□□□□ 0.86
SIX5Q8N196 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.43■□□□□ 0.86
SIX5Q8N196 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.43■□□□□ 0.86
SIX5Q8N196 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.43■□□□□ 0.86
SIX5Q8N196 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.43■□□□□ 0.86
SIX5Q8N196 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SIX5Q8N196 AL121894.2-201ENST00000602977 491 ntBASIC20.43■□□□□ 0.86
SIX5Q8N196 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.43■□□□□ 0.86
SIX5Q8N196 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.43■□□□□ 0.86
SIX5Q8N196 AC027702.1-201ENST00000563810 1770 ntBASIC20.43■□□□□ 0.86
SIX5Q8N196 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIX5Q8N196 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.43■□□□□ 0.86
SIX5Q8N196 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SIX5Q8N196 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SIX5Q8N196 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.42■□□□□ 0.86
SIX5Q8N196 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIX5Q8N196 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIX5Q8N196 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.42■□□□□ 0.86
SIX5Q8N196 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIX5Q8N196 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
SIX5Q8N196 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SIX5Q8N196 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.42■□□□□ 0.86
SIX5Q8N196 AC022616.7-201ENST00000525383 220 ntBASIC20.42■□□□□ 0.86
SIX5Q8N196 LINC01238-205ENST00000567549 1107 ntBASIC20.42■□□□□ 0.86
SIX5Q8N196 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
SIX5Q8N196 AL031985.4-201ENST00000642138 673 ntBASIC20.42■□□□□ 0.86
SIX5Q8N196 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SIX5Q8N196 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SIX5Q8N196 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIX5Q8N196 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.42■□□□□ 0.86
SIX5Q8N196 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SIX5Q8N196 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
SIX5Q8N196 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SIX5Q8N196 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIX5Q8N196 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIX5Q8N196 PKD1P6-201ENST00000343738 4769 ntBASIC20.41■□□□□ 0.86
SIX5Q8N196 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIX5Q8N196 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.41■□□□□ 0.86
SIX5Q8N196 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIX5Q8N196 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIX5Q8N196 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIX5Q8N196 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIX5Q8N196 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.41■□□□□ 0.86
SIX5Q8N196 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIX5Q8N196 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIX5Q8N196 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIX5Q8N196 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.41■□□□□ 0.86
SIX5Q8N196 EGLN1P1-201ENST00000531623 762 ntBASIC20.41■□□□□ 0.86
SIX5Q8N196 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.41■□□□□ 0.86
SIX5Q8N196 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SIX5Q8N196 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SIX5Q8N196 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SIX5Q8N196 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SIX5Q8N196 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SIX5Q8N196 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX5Q8N196 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX5Q8N196 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX5Q8N196 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX5Q8N196 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.4■□□□□ 0.86
SIX5Q8N196 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.4■□□□□ 0.86
SIX5Q8N196 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX5Q8N196 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX5Q8N196 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX5Q8N196 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX5Q8N196 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SIX5Q8N196 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
SIX5Q8N196 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.4■□□□□ 0.86
SIX5Q8N196 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SIX5Q8N196 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
SIX5Q8N196 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SIX5Q8N196 TPM4P1-201ENST00000436100 807 ntBASIC20.4■□□□□ 0.86
SIX5Q8N196 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX5Q8N196 FSCN1P1-201ENST00000568912 1481 ntBASIC20.4■□□□□ 0.86
SIX5Q8N196 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.4■□□□□ 0.86
SIX5Q8N196 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIX5Q8N196 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SIX5Q8N196 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.39■□□□□ 0.86
SIX5Q8N196 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SIX5Q8N196 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SIX5Q8N196 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SIX5Q8N196 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SIX5Q8N196 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX5Q8N196 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.39■□□□□ 0.85
SIX5Q8N196 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIX5Q8N196 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.39■□□□□ 0.85
SIX5Q8N196 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.39■□□□□ 0.85
SIX5Q8N196 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms