Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 DUSP5P1-201ENST00000441325 1139 ntBASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.04■□□□□ 0.48
RP1L1Q8IWN7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 AC011484.1-201ENST00000377652 1995 ntBASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 EP400NL-214ENST00000641289 2402 ntBASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RP1L1Q8IWN7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 AL137013.1-201ENST00000432946 1228 ntBASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 AL121906.2-201ENST00000621597 723 ntBASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 AL358472.4-201ENST00000633140 710 ntBASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.02■□□□□ 0.48
RP1L1Q8IWN7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RP1L1Q8IWN7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RP1L1Q8IWN7 AC133561.1-201ENST00000568600 2415 ntBASIC18.02■□□□□ 0.47
RP1L1Q8IWN7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RP1L1Q8IWN7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RP1L1Q8IWN7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RP1L1Q8IWN7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms