Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RPL39P62891 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPL39P62891 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
RPL39P62891 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.07□□□□□ -0.16
RPL39P62891 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.07□□□□□ -0.16
RPL39P62891 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPL39P62891 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RPL39P62891 AL136116.3-201ENST00000402907 1138 ntBASIC14.07□□□□□ -0.16
RPL39P62891 AL136162.1-201ENST00000607711 1078 ntBASIC14.07□□□□□ -0.16
RPL39P62891 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.07□□□□□ -0.16
RPL39P62891 AC026471.1-201ENST00000564629 3026 ntBASIC14.07□□□□□ -0.16
RPL39P62891 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL39P62891 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RPL39P62891 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.07□□□□□ -0.16
RPL39P62891 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL39P62891 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.07□□□□□ -0.16
RPL39P62891 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL39P62891 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RPL39P62891 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RPL39P62891 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL39P62891 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL39P62891 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
RPL39P62891 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
RPL39P62891 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RPL39P62891 KRT16P2-201ENST00000414673 1423 ntBASIC14.07□□□□□ -0.16
RPL39P62891 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPL39P62891 KRT8P36-201ENST00000489121 1440 ntBASIC14.07□□□□□ -0.16
RPL39P62891 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPL39P62891 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
RPL39P62891 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RPL39P62891 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.06□□□□□ -0.16
RPL39P62891 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.06□□□□□ -0.16
RPL39P62891 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
RPL39P62891 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.06□□□□□ -0.16
RPL39P62891 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RPL39P62891 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RPL39P62891 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.06□□□□□ -0.16
RPL39P62891 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.06□□□□□ -0.16
RPL39P62891 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.06□□□□□ -0.16
RPL39P62891 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.06□□□□□ -0.16
RPL39P62891 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
RPL39P62891 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.06□□□□□ -0.16
RPL39P62891 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.06□□□□□ -0.16
RPL39P62891 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.06□□□□□ -0.16
RPL39P62891 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.06□□□□□ -0.16
RPL39P62891 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RPL39P62891 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.06□□□□□ -0.16
RPL39P62891 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL39P62891 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RPL39P62891 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.05□□□□□ -0.16
RPL39P62891 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.05□□□□□ -0.16
RPL39P62891 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.05□□□□□ -0.16
RPL39P62891 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.05□□□□□ -0.16
RPL39P62891 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 MIR572-201ENST00000384983 95 ntBASIC14.05□□□□□ -0.16
RPL39P62891 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RPL39P62891 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.05□□□□□ -0.16
RPL39P62891 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RPL39P62891 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.05□□□□□ -0.16
RPL39P62891 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RPL39P62891 AC120498.10-201ENST00000621827 505 ntBASIC14.05□□□□□ -0.16
RPL39P62891 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.05□□□□□ -0.16
RPL39P62891 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL39P62891 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms