Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.52■□□□□ 0.39
DEFA3P59666 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
DEFA3P59666 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.52■□□□□ 0.39
DEFA3P59666 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
DEFA3P59666 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
DEFA3P59666 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.52■□□□□ 0.39
DEFA3P59666 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DEFA3P59666 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEFA3P59666 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
DEFA3P59666 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEFA3P59666 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEFA3P59666 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEFA3P59666 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEFA3P59666 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
DEFA3P59666 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.51■□□□□ 0.39
DEFA3P59666 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEFA3P59666 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
DEFA3P59666 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
DEFA3P59666 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEFA3P59666 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEFA3P59666 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEFA3P59666 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DEFA3P59666 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEFA3P59666 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.51■□□□□ 0.39
DEFA3P59666 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DEFA3P59666 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.5■□□□□ 0.39
DEFA3P59666 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.5■□□□□ 0.39
DEFA3P59666 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.5■□□□□ 0.39
DEFA3P59666 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.5■□□□□ 0.39
DEFA3P59666 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.5■□□□□ 0.39
DEFA3P59666 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
DEFA3P59666 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.5■□□□□ 0.39
DEFA3P59666 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.5■□□□□ 0.39
DEFA3P59666 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
DEFA3P59666 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
DEFA3P59666 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 AC009102.2-201ENST00000606772 1639 ntBASIC17.5■□□□□ 0.39
DEFA3P59666 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.5■□□□□ 0.39
DEFA3P59666 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DEFA3P59666 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
DEFA3P59666 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.49■□□□□ 0.39
DEFA3P59666 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.49■□□□□ 0.39
DEFA3P59666 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.49■□□□□ 0.39
DEFA3P59666 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.49■□□□□ 0.39
DEFA3P59666 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
DEFA3P59666 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.49■□□□□ 0.39
DEFA3P59666 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 AC009113.1-201ENST00000570267 2443 ntBASIC17.49■□□□□ 0.39
DEFA3P59666 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.49■□□□□ 0.39
DEFA3P59666 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
DEFA3P59666 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 AP006587.3-201ENST00000525742 1516 ntBASIC17.49■□□□□ 0.39
DEFA3P59666 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.49■□□□□ 0.39
DEFA3P59666 MIR6722-201ENST00000617286 78 ntBASIC17.49■□□□□ 0.39
DEFA3P59666 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
DEFA3P59666 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.49■□□□□ 0.39
DEFA3P59666 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.49■□□□□ 0.39
DEFA3P59666 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.49■□□□□ 0.39
DEFA3P59666 AC104581.1-202ENST00000635932 2618 ntBASIC17.49■□□□□ 0.39
DEFA3P59666 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.49■□□□□ 0.39
DEFA3P59666 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DEFA3P59666 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
DEFA3P59666 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.48■□□□□ 0.39
DEFA3P59666 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.48■□□□□ 0.39
DEFA3P59666 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DEFA3P59666 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.48■□□□□ 0.39
DEFA3P59666 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.48■□□□□ 0.39
DEFA3P59666 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEFA3P59666 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEFA3P59666 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.48■□□□□ 0.39
DEFA3P59666 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.48■□□□□ 0.39
DEFA3P59666 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEFA3P59666 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEFA3P59666 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.48■□□□□ 0.39
DEFA3P59666 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEFA3P59666 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DEFA3P59666 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms