Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 AL356740.2-201ENST00000601559 647 ntBASIC14.17□□□□□ -0.14
LINC01549A6NIU2 AC008175.2-201ENST00000612840 297 ntBASIC14.17□□□□□ -0.14
LINC01549A6NIU2 AC011298.3-201ENST00000615796 283 ntBASIC14.17□□□□□ -0.14
LINC01549A6NIU2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01549A6NIU2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 FZD10-202ENST00000539839 3282 ntBASIC14.16□□□□□ -0.14
LINC01549A6NIU2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 AC093503.3-201ENST00000624917 2352 ntBASIC14.16□□□□□ -0.14
LINC01549A6NIU2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 AC245052.3-201ENST00000450182 901 ntBASIC14.16□□□□□ -0.14
LINC01549A6NIU2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LINC01549A6NIU2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC01549A6NIU2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 AC005224.4-201ENST00000583262 1652 ntBASIC14.14□□□□□ -0.15
LINC01549A6NIU2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.14□□□□□ -0.15
LINC01549A6NIU2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 EEF1DP3-203ENST00000566025 782 ntBASIC14.14□□□□□ -0.15
LINC01549A6NIU2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
LINC01549A6NIU2 AC116050.2-201ENST00000612102 1779 ntBASIC14.14□□□□□ -0.15
LINC01549A6NIU2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms