Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LSM5Q9Y4Y9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.27■■□□□ 1
LSM5Q9Y4Y9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.27■■□□□ 1
LSM5Q9Y4Y9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LSM5Q9Y4Y9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LSM5Q9Y4Y9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LSM5Q9Y4Y9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.26■□□□□ 0.99
LSM5Q9Y4Y9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LSM5Q9Y4Y9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LSM5Q9Y4Y9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LSM5Q9Y4Y9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LSM5Q9Y4Y9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LSM5Q9Y4Y9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LSM5Q9Y4Y9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LSM5Q9Y4Y9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LSM5Q9Y4Y9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LSM5Q9Y4Y9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LSM5Q9Y4Y9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LSM5Q9Y4Y9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
LSM5Q9Y4Y9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LSM5Q9Y4Y9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LSM5Q9Y4Y9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
LSM5Q9Y4Y9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSM5Q9Y4Y9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.2■□□□□ 0.98
LSM5Q9Y4Y9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LSM5Q9Y4Y9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.19■□□□□ 0.98
LSM5Q9Y4Y9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LSM5Q9Y4Y9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LSM5Q9Y4Y9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LSM5Q9Y4Y9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.18■□□□□ 0.98
LSM5Q9Y4Y9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LSM5Q9Y4Y9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LSM5Q9Y4Y9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.17■□□□□ 0.98
LSM5Q9Y4Y9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.17■□□□□ 0.98
LSM5Q9Y4Y9 BX255925.1-201ENST00000566954 1854 ntBASIC21.16■□□□□ 0.98
LSM5Q9Y4Y9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LSM5Q9Y4Y9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.16■□□□□ 0.98
LSM5Q9Y4Y9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LSM5Q9Y4Y9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LSM5Q9Y4Y9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LSM5Q9Y4Y9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LSM5Q9Y4Y9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSM5Q9Y4Y9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LSM5Q9Y4Y9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.15■□□□□ 0.98
LSM5Q9Y4Y9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LSM5Q9Y4Y9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LSM5Q9Y4Y9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.14■□□□□ 0.97
LSM5Q9Y4Y9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LSM5Q9Y4Y9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM5Q9Y4Y9 AC006077.2-201ENST00000623591 457 ntBASIC21.13■□□□□ 0.97
LSM5Q9Y4Y9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LSM5Q9Y4Y9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LSM5Q9Y4Y9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM5Q9Y4Y9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
LSM5Q9Y4Y9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LSM5Q9Y4Y9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.12■□□□□ 0.97
LSM5Q9Y4Y9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.12■□□□□ 0.97
LSM5Q9Y4Y9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.1■□□□□ 0.97
LSM5Q9Y4Y9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LSM5Q9Y4Y9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LSM5Q9Y4Y9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LSM5Q9Y4Y9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LSM5Q9Y4Y9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.1■□□□□ 0.97
LSM5Q9Y4Y9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.1■□□□□ 0.97
LSM5Q9Y4Y9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSM5Q9Y4Y9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSM5Q9Y4Y9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSM5Q9Y4Y9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LSM5Q9Y4Y9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LSM5Q9Y4Y9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LSM5Q9Y4Y9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
LSM5Q9Y4Y9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LSM5Q9Y4Y9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LSM5Q9Y4Y9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LSM5Q9Y4Y9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LSM5Q9Y4Y9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.07■□□□□ 0.96
LSM5Q9Y4Y9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.07■□□□□ 0.96
LSM5Q9Y4Y9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LSM5Q9Y4Y9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LSM5Q9Y4Y9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LSM5Q9Y4Y9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
LSM5Q9Y4Y9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.06■□□□□ 0.96
LSM5Q9Y4Y9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM5Q9Y4Y9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LSM5Q9Y4Y9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM5Q9Y4Y9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM5Q9Y4Y9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM5Q9Y4Y9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM5Q9Y4Y9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM5Q9Y4Y9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
LSM5Q9Y4Y9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LSM5Q9Y4Y9 AL449106.1-201ENST00000608517 1980 ntBASIC21.05■□□□□ 0.96
LSM5Q9Y4Y9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM5Q9Y4Y9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LSM5Q9Y4Y9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
LSM5Q9Y4Y9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM5Q9Y4Y9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LSM5Q9Y4Y9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.04■□□□□ 0.96
LSM5Q9Y4Y9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LSM5Q9Y4Y9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms