Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF11Q9Y3C5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
RNF11Q9Y3C5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.21■■□□□ 1.63
RNF11Q9Y3C5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RNF11Q9Y3C5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RNF11Q9Y3C5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RNF11Q9Y3C5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.19■■□□□ 1.62
RNF11Q9Y3C5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RNF11Q9Y3C5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RNF11Q9Y3C5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF11Q9Y3C5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF11Q9Y3C5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF11Q9Y3C5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.18■■□□□ 1.62
RNF11Q9Y3C5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
RNF11Q9Y3C5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.17■■□□□ 1.62
RNF11Q9Y3C5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.17■■□□□ 1.62
RNF11Q9Y3C5 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.17■■□□□ 1.62
RNF11Q9Y3C5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.16■■□□□ 1.62
RNF11Q9Y3C5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.15■■□□□ 1.62
RNF11Q9Y3C5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF11Q9Y3C5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF11Q9Y3C5 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF11Q9Y3C5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF11Q9Y3C5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF11Q9Y3C5 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.1■■□□□ 1.61
RNF11Q9Y3C5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RNF11Q9Y3C5 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF11Q9Y3C5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RNF11Q9Y3C5 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF11Q9Y3C5 AC127502.1-201ENST00000399971 1502 ntBASIC25.1■■□□□ 1.61
RNF11Q9Y3C5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF11Q9Y3C5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
RNF11Q9Y3C5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF11Q9Y3C5 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF11Q9Y3C5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF11Q9Y3C5 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.09■■□□□ 1.61
RNF11Q9Y3C5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF11Q9Y3C5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.08■■□□□ 1.61
RNF11Q9Y3C5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RNF11Q9Y3C5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
RNF11Q9Y3C5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
RNF11Q9Y3C5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RNF11Q9Y3C5 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF11Q9Y3C5 AC005559.1-201ENST00000589661 871 ntBASIC25.07■■□□□ 1.6
RNF11Q9Y3C5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RNF11Q9Y3C5 DRD5P2-201ENST00000421395 2012 ntBASIC25.07■■□□□ 1.6
RNF11Q9Y3C5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF11Q9Y3C5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.06■■□□□ 1.6
RNF11Q9Y3C5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.06■■□□□ 1.6
RNF11Q9Y3C5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.06■■□□□ 1.6
RNF11Q9Y3C5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF11Q9Y3C5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.05■■□□□ 1.6
RNF11Q9Y3C5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
RNF11Q9Y3C5 AC142086.6-201ENST00000621154 1765 ntBASIC25.05■■□□□ 1.6
RNF11Q9Y3C5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF11Q9Y3C5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.04■■□□□ 1.6
RNF11Q9Y3C5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF11Q9Y3C5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RNF11Q9Y3C5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF11Q9Y3C5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF11Q9Y3C5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF11Q9Y3C5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF11Q9Y3C5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.02■■□□□ 1.6
RNF11Q9Y3C5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.02■■□□□ 1.6
RNF11Q9Y3C5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.01■■□□□ 1.59
RNF11Q9Y3C5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25■■□□□ 1.59
RNF11Q9Y3C5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25■■□□□ 1.59
RNF11Q9Y3C5 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RNF11Q9Y3C5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25■■□□□ 1.59
RNF11Q9Y3C5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25■■□□□ 1.59
RNF11Q9Y3C5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
RNF11Q9Y3C5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
RNF11Q9Y3C5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
RNF11Q9Y3C5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF11Q9Y3C5 AP004833.2-201ENST00000532228 1454 ntBASIC24.98■■□□□ 1.59
RNF11Q9Y3C5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RNF11Q9Y3C5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF11Q9Y3C5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
RNF11Q9Y3C5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
RNF11Q9Y3C5 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF11Q9Y3C5 DUX4L28-201ENST00000623687 678 ntBASIC24.97■■□□□ 1.59
RNF11Q9Y3C5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
RNF11Q9Y3C5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.96■■□□□ 1.59
RNF11Q9Y3C5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF11Q9Y3C5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
RNF11Q9Y3C5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.96■■□□□ 1.59
RNF11Q9Y3C5 AC135731.1-201ENST00000569415 2548 ntBASIC24.96■■□□□ 1.59
RNF11Q9Y3C5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF11Q9Y3C5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF11Q9Y3C5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
RNF11Q9Y3C5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
RNF11Q9Y3C5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.59
RNF11Q9Y3C5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF11Q9Y3C5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF11Q9Y3C5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RNF11Q9Y3C5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.95■■□□□ 1.58
RNF11Q9Y3C5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.94■■□□□ 1.58
RNF11Q9Y3C5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.94■■□□□ 1.58
RNF11Q9Y3C5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF11Q9Y3C5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms