Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC34.51■■■■□ 3.12
SPG7Q9UQ90 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC34.51■■■■□ 3.12
SPG7Q9UQ90 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
SPG7Q9UQ90 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC34.49■■■■□ 3.11
SPG7Q9UQ90 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC34.49■■■■□ 3.11
SPG7Q9UQ90 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC34.49■■■■□ 3.11
SPG7Q9UQ90 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC34.49■■■■□ 3.11
SPG7Q9UQ90 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
SPG7Q9UQ90 CHST11-202ENST00000546689 756 ntTSL 2 BASIC34.48■■■■□ 3.11
SPG7Q9UQ90 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC34.48■■■■□ 3.11
SPG7Q9UQ90 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
SPG7Q9UQ90 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SPG7Q9UQ90 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SPG7Q9UQ90 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
SPG7Q9UQ90 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
SPG7Q9UQ90 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC34.44■■■■□ 3.1
SPG7Q9UQ90 SRP68-213ENST00000629930 165 ntTSL 5 BASIC34.44■■■■□ 3.1
SPG7Q9UQ90 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC34.43■■■■□ 3.1
SPG7Q9UQ90 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
SPG7Q9UQ90 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
SPG7Q9UQ90 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
SPG7Q9UQ90 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC34.42■■■■□ 3.1
SPG7Q9UQ90 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC34.4■■■■□ 3.1
SPG7Q9UQ90 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
SPG7Q9UQ90 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
SPG7Q9UQ90 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
SPG7Q9UQ90 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC34.35■■■■□ 3.09
SPG7Q9UQ90 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC34.35■■■■□ 3.09
SPG7Q9UQ90 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
SPG7Q9UQ90 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
SPG7Q9UQ90 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
SPG7Q9UQ90 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
SPG7Q9UQ90 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
SPG7Q9UQ90 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
SPG7Q9UQ90 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
SPG7Q9UQ90 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC34.29■■■■□ 3.08
SPG7Q9UQ90 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
SPG7Q9UQ90 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC34.27■■■■□ 3.08
SPG7Q9UQ90 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
SPG7Q9UQ90 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC34.27■■■■□ 3.08
SPG7Q9UQ90 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
SPG7Q9UQ90 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
SPG7Q9UQ90 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
SPG7Q9UQ90 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC34.26■■■■□ 3.08
SPG7Q9UQ90 TPT1-202ENST00000379055 948 ntTSL 2 BASIC34.26■■■■□ 3.08
SPG7Q9UQ90 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC34.26■■■■□ 3.08
SPG7Q9UQ90 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC34.26■■■■□ 3.08
SPG7Q9UQ90 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
SPG7Q9UQ90 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
SPG7Q9UQ90 RARRES2P2-201ENST00000394842 485 ntBASIC34.24■■■■□ 3.07
SPG7Q9UQ90 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
SPG7Q9UQ90 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
SPG7Q9UQ90 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC34.24■■■■□ 3.07
SPG7Q9UQ90 GPX1-201ENST00000419349 1106 ntBASIC34.23■■■■□ 3.07
SPG7Q9UQ90 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
SPG7Q9UQ90 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC34.22■■■■□ 3.07
SPG7Q9UQ90 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC34.22■■■■□ 3.07
SPG7Q9UQ90 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC34.22■■■■□ 3.07
SPG7Q9UQ90 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
SPG7Q9UQ90 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
SPG7Q9UQ90 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
SPG7Q9UQ90 AC127502.1-201ENST00000399971 1502 ntBASIC34.21■■■■□ 3.07
SPG7Q9UQ90 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC34.21■■■■□ 3.07
SPG7Q9UQ90 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
SPG7Q9UQ90 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC34.18■■■■□ 3.06
SPG7Q9UQ90 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC34.18■■■■□ 3.06
SPG7Q9UQ90 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC34.18■■■■□ 3.06
SPG7Q9UQ90 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
SPG7Q9UQ90 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC34.17■■■■□ 3.06
SPG7Q9UQ90 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC34.15■■■■□ 3.06
SPG7Q9UQ90 RNF126P1-201ENST00000567452 1320 ntBASIC34.14■■■■□ 3.06
SPG7Q9UQ90 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC34.14■■■■□ 3.06
SPG7Q9UQ90 AC135983.2-203ENST00000454486 1613 ntBASIC34.14■■■■□ 3.06
SPG7Q9UQ90 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
SPG7Q9UQ90 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC34.13■■■■□ 3.05
SPG7Q9UQ90 CEP120-209ENST00000515110 606 ntTSL 3 BASIC34.12■■■■□ 3.05
SPG7Q9UQ90 AC008813.1-201ENST00000536597 885 ntBASIC34.12■■■■□ 3.05
SPG7Q9UQ90 ABHD17AP5-201ENST00000580133 923 ntBASIC34.11■■■■□ 3.05
SPG7Q9UQ90 WHAMMP2-203ENST00000563942 1603 ntBASIC34.11■■■■□ 3.05
SPG7Q9UQ90 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
SPG7Q9UQ90 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
SPG7Q9UQ90 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
SPG7Q9UQ90 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
SPG7Q9UQ90 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC34.09■■■■□ 3.05
SPG7Q9UQ90 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC34.08■■■■□ 3.05
SPG7Q9UQ90 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC34.08■■■■□ 3.05
SPG7Q9UQ90 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC34.07■■■■□ 3.04
SPG7Q9UQ90 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC34.07■■■■□ 3.04
SPG7Q9UQ90 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC34.07■■■■□ 3.04
SPG7Q9UQ90 AL135925.1-201ENST00000605920 1701 ntBASIC34.05■■■■□ 3.04
SPG7Q9UQ90 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC34.05■■■■□ 3.04
SPG7Q9UQ90 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC34.05■■■■□ 3.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms