Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.99■■■□□ 2.39
RNF146Q9NTX7 LINC00273-201ENST00000539813 1452 ntBASIC29.99■■■□□ 2.39
RNF146Q9NTX7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RNF146Q9NTX7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RNF146Q9NTX7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
RNF146Q9NTX7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.98■■■□□ 2.39
RNF146Q9NTX7 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.97■■■□□ 2.39
RNF146Q9NTX7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.97■■■□□ 2.39
RNF146Q9NTX7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
RNF146Q9NTX7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
RNF146Q9NTX7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.94■■■□□ 2.38
RNF146Q9NTX7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RNF146Q9NTX7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
RNF146Q9NTX7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.93■■■□□ 2.38
RNF146Q9NTX7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RNF146Q9NTX7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RNF146Q9NTX7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RNF146Q9NTX7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RNF146Q9NTX7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.93■■■□□ 2.38
RNF146Q9NTX7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.93■■■□□ 2.38
RNF146Q9NTX7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
RNF146Q9NTX7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
RNF146Q9NTX7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.91■■■□□ 2.38
RNF146Q9NTX7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
RNF146Q9NTX7 AL135925.1-201ENST00000605920 1701 ntBASIC29.88■■■□□ 2.37
RNF146Q9NTX7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
RNF146Q9NTX7 AC127502.1-201ENST00000399971 1502 ntBASIC29.87■■■□□ 2.37
RNF146Q9NTX7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
RNF146Q9NTX7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
RNF146Q9NTX7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.87■■■□□ 2.37
RNF146Q9NTX7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
RNF146Q9NTX7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
RNF146Q9NTX7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
RNF146Q9NTX7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
RNF146Q9NTX7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RNF146Q9NTX7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.83■■■□□ 2.37
RNF146Q9NTX7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.82■■■□□ 2.36
RNF146Q9NTX7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
RNF146Q9NTX7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.82■■■□□ 2.36
RNF146Q9NTX7 HSD17B1P1-201ENST00000590052 955 ntBASIC29.81■■■□□ 2.36
RNF146Q9NTX7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
RNF146Q9NTX7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
RNF146Q9NTX7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RNF146Q9NTX7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.77■■■□□ 2.36
RNF146Q9NTX7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
RNF146Q9NTX7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.77■■■□□ 2.36
RNF146Q9NTX7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.76■■■□□ 2.36
RNF146Q9NTX7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.36
RNF146Q9NTX7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.76■■■□□ 2.35
RNF146Q9NTX7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
RNF146Q9NTX7 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.75■■■□□ 2.35
RNF146Q9NTX7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RNF146Q9NTX7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
RNF146Q9NTX7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RNF146Q9NTX7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
RNF146Q9NTX7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.73■■■□□ 2.35
RNF146Q9NTX7 AC135983.2-203ENST00000454486 1613 ntBASIC29.71■■■□□ 2.35
RNF146Q9NTX7 WHAMMP2-203ENST00000563942 1603 ntBASIC29.71■■■□□ 2.35
RNF146Q9NTX7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
RNF146Q9NTX7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
RNF146Q9NTX7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
RNF146Q9NTX7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
RNF146Q9NTX7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
RNF146Q9NTX7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RNF146Q9NTX7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RNF146Q9NTX7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
RNF146Q9NTX7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RNF146Q9NTX7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.68■■■□□ 2.34
RNF146Q9NTX7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.68■■■□□ 2.34
RNF146Q9NTX7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
RNF146Q9NTX7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
RNF146Q9NTX7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RNF146Q9NTX7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RNF146Q9NTX7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.67■■■□□ 2.34
RNF146Q9NTX7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RNF146Q9NTX7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RNF146Q9NTX7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RNF146Q9NTX7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
RNF146Q9NTX7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.67■■■□□ 2.34
RNF146Q9NTX7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
RNF146Q9NTX7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
RNF146Q9NTX7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.65■■■□□ 2.34
RNF146Q9NTX7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.65■■■□□ 2.34
RNF146Q9NTX7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RNF146Q9NTX7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
RNF146Q9NTX7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.65■■■□□ 2.34
RNF146Q9NTX7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
RNF146Q9NTX7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.64■■■□□ 2.34
RNF146Q9NTX7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.62■■■□□ 2.33
RNF146Q9NTX7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.62■■■□□ 2.33
RNF146Q9NTX7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.61■■■□□ 2.33
RNF146Q9NTX7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RNF146Q9NTX7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RNF146Q9NTX7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.61■■■□□ 2.33
RNF146Q9NTX7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RNF146Q9NTX7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
RNF146Q9NTX7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
RNF146Q9NTX7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RNF146Q9NTX7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.59■■■□□ 2.33
RNF146Q9NTX7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms