Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
VPS33BQ9H267 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
VPS33BQ9H267 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC32.08■■■□□ 2.73
VPS33BQ9H267 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.08■■■□□ 2.73
VPS33BQ9H267 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
VPS33BQ9H267 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
VPS33BQ9H267 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.07■■■□□ 2.72
VPS33BQ9H267 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
VPS33BQ9H267 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
VPS33BQ9H267 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
VPS33BQ9H267 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.04■■■□□ 2.72
VPS33BQ9H267 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
VPS33BQ9H267 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
VPS33BQ9H267 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
VPS33BQ9H267 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
VPS33BQ9H267 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.03■■■□□ 2.72
VPS33BQ9H267 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.03■■■□□ 2.72
VPS33BQ9H267 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
VPS33BQ9H267 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
VPS33BQ9H267 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
VPS33BQ9H267 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.71
VPS33BQ9H267 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
VPS33BQ9H267 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32■■■□□ 2.71
VPS33BQ9H267 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
VPS33BQ9H267 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32■■■□□ 2.71
VPS33BQ9H267 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
VPS33BQ9H267 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.98■■■□□ 2.71
VPS33BQ9H267 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VPS33BQ9H267 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VPS33BQ9H267 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
VPS33BQ9H267 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
VPS33BQ9H267 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
VPS33BQ9H267 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.97■■■□□ 2.71
VPS33BQ9H267 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.97■■■□□ 2.71
VPS33BQ9H267 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
VPS33BQ9H267 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.96■■■□□ 2.71
VPS33BQ9H267 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.95■■■□□ 2.71
VPS33BQ9H267 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
VPS33BQ9H267 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
VPS33BQ9H267 AC008813.1-201ENST00000536597 885 ntBASIC31.94■■■□□ 2.7
VPS33BQ9H267 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
VPS33BQ9H267 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.93■■■□□ 2.7
VPS33BQ9H267 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VPS33BQ9H267 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VPS33BQ9H267 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
VPS33BQ9H267 NTF6A-201ENST00000591175 560 ntBASIC31.91■■■□□ 2.7
VPS33BQ9H267 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.91■■■□□ 2.7
VPS33BQ9H267 AC022413.1-201ENST00000624602 984 ntBASIC31.91■■■□□ 2.7
VPS33BQ9H267 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
VPS33BQ9H267 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
VPS33BQ9H267 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.9■■■□□ 2.7
VPS33BQ9H267 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
VPS33BQ9H267 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
VPS33BQ9H267 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
VPS33BQ9H267 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
VPS33BQ9H267 AC010864.1-201ENST00000609407 1511 ntBASIC31.86■■■□□ 2.69
VPS33BQ9H267 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.85■■■□□ 2.69
VPS33BQ9H267 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
VPS33BQ9H267 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.85■■■□□ 2.69
VPS33BQ9H267 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
VPS33BQ9H267 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.84■■■□□ 2.69
VPS33BQ9H267 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
VPS33BQ9H267 AC012354.3-201ENST00000623734 483 ntBASIC31.83■■■□□ 2.69
VPS33BQ9H267 AL161658.1-201ENST00000623641 1967 ntBASIC31.83■■■□□ 2.69
VPS33BQ9H267 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.82■■■□□ 2.68
VPS33BQ9H267 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
VPS33BQ9H267 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
VPS33BQ9H267 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
VPS33BQ9H267 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
VPS33BQ9H267 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
VPS33BQ9H267 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
VPS33BQ9H267 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
VPS33BQ9H267 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.8■■■□□ 2.68
VPS33BQ9H267 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
VPS33BQ9H267 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
VPS33BQ9H267 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
VPS33BQ9H267 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
VPS33BQ9H267 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.78■■■□□ 2.68
VPS33BQ9H267 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
VPS33BQ9H267 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
VPS33BQ9H267 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
VPS33BQ9H267 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
VPS33BQ9H267 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
VPS33BQ9H267 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
VPS33BQ9H267 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
VPS33BQ9H267 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.71■■■□□ 2.67
VPS33BQ9H267 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
VPS33BQ9H267 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
VPS33BQ9H267 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.7■■■□□ 2.67
VPS33BQ9H267 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
VPS33BQ9H267 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.7■■■□□ 2.66
VPS33BQ9H267 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
VPS33BQ9H267 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
VPS33BQ9H267 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.69■■■□□ 2.66
VPS33BQ9H267 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
VPS33BQ9H267 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.68■■■□□ 2.66
VPS33BQ9H267 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
VPS33BQ9H267 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
VPS33BQ9H267 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.67■■■□□ 2.66
VPS33BQ9H267 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms