Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
POLR2J3Q9H1A7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
POLR2J3Q9H1A7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
POLR2J3Q9H1A7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
POLR2J3Q9H1A7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
POLR2J3Q9H1A7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
POLR2J3Q9H1A7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.83■■□□□ 1.41
POLR2J3Q9H1A7 AP004833.2-201ENST00000532228 1454 ntBASIC23.83■■□□□ 1.41
POLR2J3Q9H1A7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
POLR2J3Q9H1A7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
POLR2J3Q9H1A7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
POLR2J3Q9H1A7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
POLR2J3Q9H1A7 CAHM-201ENST00000604200 896 ntBASIC23.8■■□□□ 1.4
POLR2J3Q9H1A7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
POLR2J3Q9H1A7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
POLR2J3Q9H1A7 AC136428.2-201ENST00000563187 214 ntBASIC23.79■■□□□ 1.4
POLR2J3Q9H1A7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
POLR2J3Q9H1A7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
POLR2J3Q9H1A7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.78■■□□□ 1.4
POLR2J3Q9H1A7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
POLR2J3Q9H1A7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
POLR2J3Q9H1A7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
POLR2J3Q9H1A7 AC097358.2-201ENST00000607541 1159 ntBASIC23.76■■□□□ 1.39
POLR2J3Q9H1A7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.76■■□□□ 1.39
POLR2J3Q9H1A7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
POLR2J3Q9H1A7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.76■■□□□ 1.39
POLR2J3Q9H1A7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
POLR2J3Q9H1A7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
POLR2J3Q9H1A7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
POLR2J3Q9H1A7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
POLR2J3Q9H1A7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
POLR2J3Q9H1A7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.74■■□□□ 1.39
POLR2J3Q9H1A7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
POLR2J3Q9H1A7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
POLR2J3Q9H1A7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
POLR2J3Q9H1A7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.73■■□□□ 1.39
POLR2J3Q9H1A7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
POLR2J3Q9H1A7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
POLR2J3Q9H1A7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
POLR2J3Q9H1A7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
POLR2J3Q9H1A7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
POLR2J3Q9H1A7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.7■■□□□ 1.38
POLR2J3Q9H1A7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.7■■□□□ 1.38
POLR2J3Q9H1A7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
POLR2J3Q9H1A7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
POLR2J3Q9H1A7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
POLR2J3Q9H1A7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
POLR2J3Q9H1A7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
POLR2J3Q9H1A7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
POLR2J3Q9H1A7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
POLR2J3Q9H1A7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
POLR2J3Q9H1A7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
POLR2J3Q9H1A7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
POLR2J3Q9H1A7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
POLR2J3Q9H1A7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR2J3Q9H1A7 AL121749.1-202ENST00000609313 2153 ntBASIC23.67■■□□□ 1.38
POLR2J3Q9H1A7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
POLR2J3Q9H1A7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR2J3Q9H1A7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR2J3Q9H1A7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR2J3Q9H1A7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR2J3Q9H1A7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
POLR2J3Q9H1A7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.67■■□□□ 1.38
POLR2J3Q9H1A7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
POLR2J3Q9H1A7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
POLR2J3Q9H1A7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
POLR2J3Q9H1A7 AC127502.1-201ENST00000399971 1502 ntBASIC23.65■■□□□ 1.38
POLR2J3Q9H1A7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
POLR2J3Q9H1A7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
POLR2J3Q9H1A7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
POLR2J3Q9H1A7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.65■■□□□ 1.38
POLR2J3Q9H1A7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
POLR2J3Q9H1A7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
POLR2J3Q9H1A7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
POLR2J3Q9H1A7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
POLR2J3Q9H1A7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
POLR2J3Q9H1A7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
POLR2J3Q9H1A7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
POLR2J3Q9H1A7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
POLR2J3Q9H1A7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
POLR2J3Q9H1A7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.62■■□□□ 1.37
POLR2J3Q9H1A7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.62■■□□□ 1.37
POLR2J3Q9H1A7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.62■■□□□ 1.37
POLR2J3Q9H1A7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
POLR2J3Q9H1A7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
POLR2J3Q9H1A7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
POLR2J3Q9H1A7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
POLR2J3Q9H1A7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
POLR2J3Q9H1A7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
POLR2J3Q9H1A7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
POLR2J3Q9H1A7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.61■■□□□ 1.37
POLR2J3Q9H1A7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.61■■□□□ 1.37
POLR2J3Q9H1A7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
POLR2J3Q9H1A7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
POLR2J3Q9H1A7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.6■■□□□ 1.37
POLR2J3Q9H1A7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
POLR2J3Q9H1A7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.6■■□□□ 1.37
POLR2J3Q9H1A7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
POLR2J3Q9H1A7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
POLR2J3Q9H1A7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms