Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.23■■■□□ 2.75
RTFDC1Q9BY42 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RTFDC1Q9BY42 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RTFDC1Q9BY42 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
RTFDC1Q9BY42 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
RTFDC1Q9BY42 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.21■■■□□ 2.75
RTFDC1Q9BY42 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.2■■■□□ 2.75
RTFDC1Q9BY42 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.2■■■□□ 2.75
RTFDC1Q9BY42 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.2■■■□□ 2.75
RTFDC1Q9BY42 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
RTFDC1Q9BY42 GPX1-201ENST00000419349 1106 ntBASIC32.19■■■□□ 2.74
RTFDC1Q9BY42 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
RTFDC1Q9BY42 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
RTFDC1Q9BY42 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.18■■■□□ 2.74
RTFDC1Q9BY42 ABHD17AP5-201ENST00000580133 923 ntBASIC32.18■■■□□ 2.74
RTFDC1Q9BY42 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RTFDC1Q9BY42 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
RTFDC1Q9BY42 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.15■■■□□ 2.74
RTFDC1Q9BY42 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RTFDC1Q9BY42 RNF126P1-201ENST00000567452 1320 ntBASIC32.15■■■□□ 2.74
RTFDC1Q9BY42 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.15■■■□□ 2.74
RTFDC1Q9BY42 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RTFDC1Q9BY42 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RTFDC1Q9BY42 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC32.14■■■□□ 2.74
RTFDC1Q9BY42 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
RTFDC1Q9BY42 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
RTFDC1Q9BY42 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
RTFDC1Q9BY42 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
RTFDC1Q9BY42 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
RTFDC1Q9BY42 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RTFDC1Q9BY42 TPT1-202ENST00000379055 948 ntTSL 2 BASIC32.11■■■□□ 2.73
RTFDC1Q9BY42 AL161658.1-201ENST00000623641 1967 ntBASIC32.1■■■□□ 2.73
RTFDC1Q9BY42 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
RTFDC1Q9BY42 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
RTFDC1Q9BY42 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
RTFDC1Q9BY42 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
RTFDC1Q9BY42 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RTFDC1Q9BY42 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
RTFDC1Q9BY42 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RTFDC1Q9BY42 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RTFDC1Q9BY42 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RTFDC1Q9BY42 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RTFDC1Q9BY42 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
RTFDC1Q9BY42 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
RTFDC1Q9BY42 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RTFDC1Q9BY42 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.05■■■□□ 2.72
RTFDC1Q9BY42 AC010864.1-201ENST00000609407 1511 ntBASIC32.05■■■□□ 2.72
RTFDC1Q9BY42 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RTFDC1Q9BY42 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RTFDC1Q9BY42 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
RTFDC1Q9BY42 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.04■■■□□ 2.72
RTFDC1Q9BY42 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
RTFDC1Q9BY42 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.03■■■□□ 2.72
RTFDC1Q9BY42 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC32.03■■■□□ 2.72
RTFDC1Q9BY42 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RTFDC1Q9BY42 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.01■■■□□ 2.71
RTFDC1Q9BY42 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32■■■□□ 2.71
RTFDC1Q9BY42 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
RTFDC1Q9BY42 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
RTFDC1Q9BY42 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.99■■■□□ 2.71
RTFDC1Q9BY42 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RTFDC1Q9BY42 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
RTFDC1Q9BY42 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
RTFDC1Q9BY42 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.98■■■□□ 2.71
RTFDC1Q9BY42 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
RTFDC1Q9BY42 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.95■■■□□ 2.71
RTFDC1Q9BY42 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.95■■■□□ 2.71
RTFDC1Q9BY42 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.95■■■□□ 2.71
RTFDC1Q9BY42 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
RTFDC1Q9BY42 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
RTFDC1Q9BY42 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
RTFDC1Q9BY42 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
RTFDC1Q9BY42 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RTFDC1Q9BY42 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
RTFDC1Q9BY42 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
RTFDC1Q9BY42 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
RTFDC1Q9BY42 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.91■■■□□ 2.7
RTFDC1Q9BY42 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.91■■■□□ 2.7
RTFDC1Q9BY42 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
RTFDC1Q9BY42 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
RTFDC1Q9BY42 AC022413.1-201ENST00000624602 984 ntBASIC31.9■■■□□ 2.7
RTFDC1Q9BY42 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.9■■■□□ 2.7
RTFDC1Q9BY42 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
RTFDC1Q9BY42 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
RTFDC1Q9BY42 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.89■■■□□ 2.7
RTFDC1Q9BY42 AC008813.1-201ENST00000536597 885 ntBASIC31.89■■■□□ 2.7
RTFDC1Q9BY42 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.89■■■□□ 2.7
RTFDC1Q9BY42 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RTFDC1Q9BY42 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RTFDC1Q9BY42 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.86■■■□□ 2.69
RTFDC1Q9BY42 NTF6A-201ENST00000591175 560 ntBASIC31.86■■■□□ 2.69
RTFDC1Q9BY42 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
RTFDC1Q9BY42 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
RTFDC1Q9BY42 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.83■■■□□ 2.69
RTFDC1Q9BY42 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
RTFDC1Q9BY42 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
RTFDC1Q9BY42 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.81■■■□□ 2.68
RTFDC1Q9BY42 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RTFDC1Q9BY42 AC135983.2-203ENST00000454486 1613 ntBASIC31.8■■■□□ 2.68
RTFDC1Q9BY42 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms