Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDK5RAP2Q96SN8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDK5RAP2Q96SN8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CDK5RAP2Q96SN8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDK5RAP2Q96SN8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDK5RAP2Q96SN8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDK5RAP2Q96SN8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CDK5RAP2Q96SN8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.13■■■□□ 2.57
CDK5RAP2Q96SN8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.13■■■□□ 2.57
CDK5RAP2Q96SN8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDK5RAP2Q96SN8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDK5RAP2Q96SN8 DUX4L13-201ENST00000554103 1267 ntBASIC31.12■■■□□ 2.57
CDK5RAP2Q96SN8 DUX4L15-201ENST00000611059 1267 ntBASIC31.12■■■□□ 2.57
CDK5RAP2Q96SN8 DUX4L23-201ENST00000615195 1269 ntBASIC31.12■■■□□ 2.57
CDK5RAP2Q96SN8 DUX4L24-201ENST00000617576 1269 ntBASIC31.12■■■□□ 2.57
CDK5RAP2Q96SN8 DUX4L22-201ENST00000618238 1269 ntBASIC31.12■■■□□ 2.57
CDK5RAP2Q96SN8 DUX4L20-201ENST00000619712 1269 ntBASIC31.12■■■□□ 2.57
CDK5RAP2Q96SN8 DUX4L21-201ENST00000622058 1269 ntBASIC31.12■■■□□ 2.57
CDK5RAP2Q96SN8 DUX4L10-201ENST00000622460 1267 ntBASIC31.12■■■□□ 2.57
CDK5RAP2Q96SN8 DUX4L25-201ENST00000624915 1269 ntBASIC31.12■■■□□ 2.57
CDK5RAP2Q96SN8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDK5RAP2Q96SN8 MIR639-201ENST00000384974 98 ntBASIC31.11■■■□□ 2.57
CDK5RAP2Q96SN8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.1■■■□□ 2.57
CDK5RAP2Q96SN8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
CDK5RAP2Q96SN8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
CDK5RAP2Q96SN8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.08■■■□□ 2.57
CDK5RAP2Q96SN8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.08■■■□□ 2.57
CDK5RAP2Q96SN8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDK5RAP2Q96SN8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDK5RAP2Q96SN8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CDK5RAP2Q96SN8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.07■■■□□ 2.56
CDK5RAP2Q96SN8 AC135983.2-203ENST00000454486 1613 ntBASIC31.06■■■□□ 2.56
CDK5RAP2Q96SN8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CDK5RAP2Q96SN8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDK5RAP2Q96SN8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDK5RAP2Q96SN8 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.04■■■□□ 2.56
CDK5RAP2Q96SN8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
CDK5RAP2Q96SN8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CDK5RAP2Q96SN8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
CDK5RAP2Q96SN8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDK5RAP2Q96SN8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CDK5RAP2Q96SN8 WHAMMP2-203ENST00000563942 1603 ntBASIC31.02■■■□□ 2.56
CDK5RAP2Q96SN8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDK5RAP2Q96SN8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.01■■■□□ 2.56
CDK5RAP2Q96SN8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
CDK5RAP2Q96SN8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
CDK5RAP2Q96SN8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31■■■□□ 2.55
CDK5RAP2Q96SN8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CDK5RAP2Q96SN8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.97■■■□□ 2.55
CDK5RAP2Q96SN8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDK5RAP2Q96SN8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDK5RAP2Q96SN8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.96■■■□□ 2.55
CDK5RAP2Q96SN8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDK5RAP2Q96SN8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.96■■■□□ 2.55
CDK5RAP2Q96SN8 AC127502.1-201ENST00000399971 1502 ntBASIC30.96■■■□□ 2.55
CDK5RAP2Q96SN8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.95■■■□□ 2.54
CDK5RAP2Q96SN8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
CDK5RAP2Q96SN8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
CDK5RAP2Q96SN8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.93■■■□□ 2.54
CDK5RAP2Q96SN8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CDK5RAP2Q96SN8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CDK5RAP2Q96SN8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.92■■■□□ 2.54
CDK5RAP2Q96SN8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
CDK5RAP2Q96SN8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.91■■■□□ 2.54
CDK5RAP2Q96SN8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CDK5RAP2Q96SN8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.91■■■□□ 2.54
CDK5RAP2Q96SN8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CDK5RAP2Q96SN8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDK5RAP2Q96SN8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.89■■■□□ 2.54
CDK5RAP2Q96SN8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.89■■■□□ 2.54
CDK5RAP2Q96SN8 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.89■■■□□ 2.54
CDK5RAP2Q96SN8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
CDK5RAP2Q96SN8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.89■■■□□ 2.54
CDK5RAP2Q96SN8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CDK5RAP2Q96SN8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.89■■■□□ 2.53
CDK5RAP2Q96SN8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.88■■■□□ 2.53
CDK5RAP2Q96SN8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CDK5RAP2Q96SN8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDK5RAP2Q96SN8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDK5RAP2Q96SN8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CDK5RAP2Q96SN8 ST7-AS1-201ENST00000456775 1889 ntBASIC30.85■■■□□ 2.53
CDK5RAP2Q96SN8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CDK5RAP2Q96SN8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CDK5RAP2Q96SN8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CDK5RAP2Q96SN8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CDK5RAP2Q96SN8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CDK5RAP2Q96SN8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.82■■■□□ 2.52
CDK5RAP2Q96SN8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
CDK5RAP2Q96SN8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDK5RAP2Q96SN8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.81■■■□□ 2.52
CDK5RAP2Q96SN8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDK5RAP2Q96SN8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.8■■■□□ 2.52
CDK5RAP2Q96SN8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDK5RAP2Q96SN8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.8■■■□□ 2.52
CDK5RAP2Q96SN8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.8■■■□□ 2.52
CDK5RAP2Q96SN8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDK5RAP2Q96SN8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.78■■■□□ 2.52
CDK5RAP2Q96SN8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
CDK5RAP2Q96SN8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CDK5RAP2Q96SN8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms