Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CASD1Q96PB1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.23■■■□□ 2.11
CASD1Q96PB1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.23■■■□□ 2.11
CASD1Q96PB1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CASD1Q96PB1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CASD1Q96PB1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CASD1Q96PB1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CASD1Q96PB1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CASD1Q96PB1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.21■■■□□ 2.11
CASD1Q96PB1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CASD1Q96PB1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CASD1Q96PB1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CASD1Q96PB1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.19■■■□□ 2.1
CASD1Q96PB1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.19■■■□□ 2.1
CASD1Q96PB1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CASD1Q96PB1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.17■■■□□ 2.1
CASD1Q96PB1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CASD1Q96PB1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CASD1Q96PB1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CASD1Q96PB1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.16■■■□□ 2.1
CASD1Q96PB1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.16■■■□□ 2.1
CASD1Q96PB1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CASD1Q96PB1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.15■■■□□ 2.1
CASD1Q96PB1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.15■■■□□ 2.1
CASD1Q96PB1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
CASD1Q96PB1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CASD1Q96PB1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CASD1Q96PB1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CASD1Q96PB1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
CASD1Q96PB1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CASD1Q96PB1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CASD1Q96PB1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
CASD1Q96PB1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
CASD1Q96PB1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
CASD1Q96PB1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CASD1Q96PB1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.13■■■□□ 2.09
CASD1Q96PB1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CASD1Q96PB1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CASD1Q96PB1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CASD1Q96PB1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CASD1Q96PB1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
CASD1Q96PB1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.11■■■□□ 2.09
CASD1Q96PB1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.09■■■□□ 2.09
CASD1Q96PB1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CASD1Q96PB1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CASD1Q96PB1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.08■■■□□ 2.09
CASD1Q96PB1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CASD1Q96PB1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
CASD1Q96PB1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
CASD1Q96PB1 AC127502.1-201ENST00000399971 1502 ntBASIC28.06■■■□□ 2.08
CASD1Q96PB1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
CASD1Q96PB1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CASD1Q96PB1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CASD1Q96PB1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
CASD1Q96PB1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
CASD1Q96PB1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.03■■■□□ 2.08
CASD1Q96PB1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
CASD1Q96PB1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CASD1Q96PB1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CASD1Q96PB1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CASD1Q96PB1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CASD1Q96PB1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CASD1Q96PB1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.01■■■□□ 2.07
CASD1Q96PB1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CASD1Q96PB1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28■■■□□ 2.07
CASD1Q96PB1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.99■■■□□ 2.07
CASD1Q96PB1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.99■■■□□ 2.07
CASD1Q96PB1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
CASD1Q96PB1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CASD1Q96PB1 AC135983.2-203ENST00000454486 1613 ntBASIC27.98■■■□□ 2.07
CASD1Q96PB1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.98■■■□□ 2.07
CASD1Q96PB1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.97■■■□□ 2.07
CASD1Q96PB1 WHAMMP2-203ENST00000563942 1603 ntBASIC27.97■■■□□ 2.07
CASD1Q96PB1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.97■■■□□ 2.07
CASD1Q96PB1 AL135925.1-201ENST00000605920 1701 ntBASIC27.97■■■□□ 2.07
CASD1Q96PB1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CASD1Q96PB1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CASD1Q96PB1 RARRES2P2-201ENST00000394842 485 ntBASIC27.96■■■□□ 2.07
CASD1Q96PB1 GPX1-201ENST00000419349 1106 ntBASIC27.96■■■□□ 2.07
CASD1Q96PB1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.96■■■□□ 2.07
CASD1Q96PB1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
CASD1Q96PB1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
CASD1Q96PB1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.95■■■□□ 2.06
CASD1Q96PB1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CASD1Q96PB1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.94■■■□□ 2.06
CASD1Q96PB1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CASD1Q96PB1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
CASD1Q96PB1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CASD1Q96PB1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
CASD1Q96PB1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
CASD1Q96PB1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
CASD1Q96PB1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
CASD1Q96PB1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
CASD1Q96PB1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CASD1Q96PB1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
CASD1Q96PB1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
CASD1Q96PB1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.91■■■□□ 2.06
CASD1Q96PB1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.9■■■□□ 2.06
CASD1Q96PB1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
CASD1Q96PB1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms