Protein–RNA interactions for Protein: Q96AT9

RPE, Ribulose-phosphate 3-epimerase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPEQ96AT9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPEQ96AT9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPEQ96AT9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPEQ96AT9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPEQ96AT9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPEQ96AT9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPEQ96AT9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RPEQ96AT9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.08■□□□□ 0.97
RPEQ96AT9 AC127502.1-201ENST00000399971 1502 ntBASIC21.08■□□□□ 0.96
RPEQ96AT9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.07■□□□□ 0.96
RPEQ96AT9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.07■□□□□ 0.96
RPEQ96AT9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.06■□□□□ 0.96
RPEQ96AT9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPEQ96AT9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.06■□□□□ 0.96
RPEQ96AT9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPEQ96AT9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPEQ96AT9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPEQ96AT9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPEQ96AT9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPEQ96AT9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RPEQ96AT9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RPEQ96AT9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPEQ96AT9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
RPEQ96AT9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.04■□□□□ 0.96
RPEQ96AT9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPEQ96AT9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RPEQ96AT9 ABCB10P3-201ENST00000561950 2166 ntBASIC21.04■□□□□ 0.96
RPEQ96AT9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RPEQ96AT9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPEQ96AT9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPEQ96AT9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RPEQ96AT9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPEQ96AT9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPEQ96AT9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPEQ96AT9 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPEQ96AT9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPEQ96AT9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RPEQ96AT9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RPEQ96AT9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPEQ96AT9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPEQ96AT9 DUX4L29-201ENST00000425409 679 ntBASIC20.99■□□□□ 0.95
RPEQ96AT9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPEQ96AT9 AL139393.2-201ENST00000608721 2025 ntBASIC20.98■□□□□ 0.95
RPEQ96AT9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RPEQ96AT9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPEQ96AT9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RPEQ96AT9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.97■□□□□ 0.95
RPEQ96AT9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPEQ96AT9 AC139426.1-201ENST00000568218 2529 ntBASIC20.95■□□□□ 0.94
RPEQ96AT9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPEQ96AT9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RPEQ96AT9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPEQ96AT9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPEQ96AT9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPEQ96AT9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPEQ96AT9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPEQ96AT9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPEQ96AT9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.94■□□□□ 0.94
RPEQ96AT9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPEQ96AT9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPEQ96AT9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPEQ96AT9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPEQ96AT9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.93■□□□□ 0.94
RPEQ96AT9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.93■□□□□ 0.94
RPEQ96AT9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.93■□□□□ 0.94
RPEQ96AT9 AC021231.2-201ENST00000594613 730 ntBASIC20.93■□□□□ 0.94
RPEQ96AT9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPEQ96AT9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPEQ96AT9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPEQ96AT9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
RPEQ96AT9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPEQ96AT9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPEQ96AT9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPEQ96AT9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RPEQ96AT9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.91■□□□□ 0.94
RPEQ96AT9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPEQ96AT9 AP004833.2-201ENST00000532228 1454 ntBASIC20.91■□□□□ 0.94
RPEQ96AT9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.91■□□□□ 0.94
RPEQ96AT9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.9■□□□□ 0.94
RPEQ96AT9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPEQ96AT9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPEQ96AT9 LINC00273-201ENST00000539813 1452 ntBASIC20.9■□□□□ 0.94
RPEQ96AT9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPEQ96AT9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPEQ96AT9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPEQ96AT9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.89■□□□□ 0.93
RPEQ96AT9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.89■□□□□ 0.93
RPEQ96AT9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.89■□□□□ 0.93
RPEQ96AT9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.89■□□□□ 0.93
RPEQ96AT9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.88■□□□□ 0.93
RPEQ96AT9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RPEQ96AT9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPEQ96AT9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RPEQ96AT9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPEQ96AT9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.87■□□□□ 0.93
RPEQ96AT9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPEQ96AT9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.87■□□□□ 0.93
RPEQ96AT9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RPEQ96AT9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RPEQ96AT9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms