Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
STAG1Q8WVM7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
STAG1Q8WVM7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.82■■■□□ 2.52
STAG1Q8WVM7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.81■■■□□ 2.52
STAG1Q8WVM7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.81■■■□□ 2.52
STAG1Q8WVM7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
STAG1Q8WVM7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
STAG1Q8WVM7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.8■■■□□ 2.52
STAG1Q8WVM7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.8■■■□□ 2.52
STAG1Q8WVM7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
STAG1Q8WVM7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
STAG1Q8WVM7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.79■■■□□ 2.52
STAG1Q8WVM7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.79■■■□□ 2.52
STAG1Q8WVM7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
STAG1Q8WVM7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
STAG1Q8WVM7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
STAG1Q8WVM7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.78■■■□□ 2.52
STAG1Q8WVM7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
STAG1Q8WVM7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
STAG1Q8WVM7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
STAG1Q8WVM7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
STAG1Q8WVM7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
STAG1Q8WVM7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.76■■■□□ 2.51
STAG1Q8WVM7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
STAG1Q8WVM7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
STAG1Q8WVM7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
STAG1Q8WVM7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
STAG1Q8WVM7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
STAG1Q8WVM7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.75■■■□□ 2.51
STAG1Q8WVM7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
STAG1Q8WVM7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
STAG1Q8WVM7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
STAG1Q8WVM7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
STAG1Q8WVM7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
STAG1Q8WVM7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
STAG1Q8WVM7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
STAG1Q8WVM7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
STAG1Q8WVM7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
STAG1Q8WVM7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
STAG1Q8WVM7 LINC00273-201ENST00000539813 1452 ntBASIC30.71■■■□□ 2.51
STAG1Q8WVM7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.71■■■□□ 2.51
STAG1Q8WVM7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.71■■■□□ 2.51
STAG1Q8WVM7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
STAG1Q8WVM7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
STAG1Q8WVM7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.7■■■□□ 2.51
STAG1Q8WVM7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
STAG1Q8WVM7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
STAG1Q8WVM7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
STAG1Q8WVM7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
STAG1Q8WVM7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
STAG1Q8WVM7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
STAG1Q8WVM7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
STAG1Q8WVM7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
STAG1Q8WVM7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
STAG1Q8WVM7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.64■■■□□ 2.5
STAG1Q8WVM7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
STAG1Q8WVM7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
STAG1Q8WVM7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.64■■■□□ 2.5
STAG1Q8WVM7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
STAG1Q8WVM7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
STAG1Q8WVM7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
STAG1Q8WVM7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
STAG1Q8WVM7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
STAG1Q8WVM7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.61■■■□□ 2.49
STAG1Q8WVM7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.61■■■□□ 2.49
STAG1Q8WVM7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
STAG1Q8WVM7 AC135983.2-203ENST00000454486 1613 ntBASIC30.61■■■□□ 2.49
STAG1Q8WVM7 AL139393.2-201ENST00000608721 2025 ntBASIC30.61■■■□□ 2.49
STAG1Q8WVM7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.6■■■□□ 2.49
STAG1Q8WVM7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.6■■■□□ 2.49
STAG1Q8WVM7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.59■■■□□ 2.49
STAG1Q8WVM7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
STAG1Q8WVM7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
STAG1Q8WVM7 LINC01971-201ENST00000617888 1048 ntBASIC30.57■■■□□ 2.48
STAG1Q8WVM7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.56■■■□□ 2.48
STAG1Q8WVM7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
STAG1Q8WVM7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
STAG1Q8WVM7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
STAG1Q8WVM7 AP004833.2-201ENST00000532228 1454 ntBASIC30.56■■■□□ 2.48
STAG1Q8WVM7 WHAMMP2-203ENST00000563942 1603 ntBASIC30.55■■■□□ 2.48
STAG1Q8WVM7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.55■■■□□ 2.48
STAG1Q8WVM7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.55■■■□□ 2.48
STAG1Q8WVM7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.55■■■□□ 2.48
STAG1Q8WVM7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.54■■■□□ 2.48
STAG1Q8WVM7 HLA-V-202ENST00000446817 847 ntBASIC30.54■■■□□ 2.48
STAG1Q8WVM7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.54■■■□□ 2.48
STAG1Q8WVM7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
STAG1Q8WVM7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
STAG1Q8WVM7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.53■■■□□ 2.48
STAG1Q8WVM7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
STAG1Q8WVM7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
STAG1Q8WVM7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
STAG1Q8WVM7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
STAG1Q8WVM7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
STAG1Q8WVM7 ABCB10P3-201ENST00000561950 2166 ntBASIC30.49■■■□□ 2.47
STAG1Q8WVM7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
STAG1Q8WVM7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
STAG1Q8WVM7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.47■■■□□ 2.47
STAG1Q8WVM7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.47■■■□□ 2.47
STAG1Q8WVM7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms