Protein–RNA interactions for Protein: Q8WVK2

SNRNP27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, humanhuman

Known RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27Q8WVK2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNRNP27Q8WVK2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNRNP27Q8WVK2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
SNRNP27Q8WVK2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
SNRNP27Q8WVK2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
SNRNP27Q8WVK2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.03■■□□□ 1.6
SNRNP27Q8WVK2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.03■■□□□ 1.6
SNRNP27Q8WVK2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
SNRNP27Q8WVK2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNRNP27Q8WVK2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.02■■□□□ 1.6
SNRNP27Q8WVK2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SNRNP27Q8WVK2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SNRNP27Q8WVK2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SNRNP27Q8WVK2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
SNRNP27Q8WVK2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNRNP27Q8WVK2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC25■■□□□ 1.59
SNRNP27Q8WVK2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25■■□□□ 1.59
SNRNP27Q8WVK2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
SNRNP27Q8WVK2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNRNP27Q8WVK2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNRNP27Q8WVK2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SNRNP27Q8WVK2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 DUX4L13-201ENST00000554103 1267 ntBASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 DUX4L15-201ENST00000611059 1267 ntBASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 DUX4L23-201ENST00000615195 1269 ntBASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 DUX4L24-201ENST00000617576 1269 ntBASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 DUX4L22-201ENST00000618238 1269 ntBASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 DUX4L20-201ENST00000619712 1269 ntBASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 DUX4L21-201ENST00000622058 1269 ntBASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 DUX4L10-201ENST00000622460 1267 ntBASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 DUX4L25-201ENST00000624915 1269 ntBASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.98■■□□□ 1.59
SNRNP27Q8WVK2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
SNRNP27Q8WVK2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
SNRNP27Q8WVK2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNRNP27Q8WVK2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNRNP27Q8WVK2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.96■■□□□ 1.59
SNRNP27Q8WVK2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNRNP27Q8WVK2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNRNP27Q8WVK2 RARRES2P2-201ENST00000394842 485 ntBASIC24.95■■□□□ 1.58
SNRNP27Q8WVK2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNRNP27Q8WVK2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.95■■□□□ 1.58
SNRNP27Q8WVK2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNRNP27Q8WVK2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNRNP27Q8WVK2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.94■■□□□ 1.58
SNRNP27Q8WVK2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNRNP27Q8WVK2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SNRNP27Q8WVK2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.93■■□□□ 1.58
SNRNP27Q8WVK2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNRNP27Q8WVK2 ABHD17AP5-201ENST00000580133 923 ntBASIC24.93■■□□□ 1.58
SNRNP27Q8WVK2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.93■■□□□ 1.58
SNRNP27Q8WVK2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNRNP27Q8WVK2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNRNP27Q8WVK2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SNRNP27Q8WVK2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SNRNP27Q8WVK2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNRNP27Q8WVK2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
SNRNP27Q8WVK2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNRNP27Q8WVK2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNRNP27Q8WVK2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNRNP27Q8WVK2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.9■■□□□ 1.58
SNRNP27Q8WVK2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SNRNP27Q8WVK2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SNRNP27Q8WVK2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.89■■□□□ 1.58
SNRNP27Q8WVK2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SNRNP27Q8WVK2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.89■■□□□ 1.58
SNRNP27Q8WVK2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.89■■□□□ 1.57
SNRNP27Q8WVK2 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.88■■□□□ 1.57
SNRNP27Q8WVK2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
SNRNP27Q8WVK2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SNRNP27Q8WVK2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.88■■□□□ 1.57
SNRNP27Q8WVK2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SNRNP27Q8WVK2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SNRNP27Q8WVK2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SNRNP27Q8WVK2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.87■■□□□ 1.57
SNRNP27Q8WVK2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.85■■□□□ 1.57
SNRNP27Q8WVK2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP27Q8WVK2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP27Q8WVK2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP27Q8WVK2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP27Q8WVK2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP27Q8WVK2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP27Q8WVK2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP27Q8WVK2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP27Q8WVK2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP27Q8WVK2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.84■■□□□ 1.57
SNRNP27Q8WVK2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.84■■□□□ 1.57
SNRNP27Q8WVK2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
SNRNP27Q8WVK2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.83■■□□□ 1.57
SNRNP27Q8WVK2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SNRNP27Q8WVK2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNRNP27Q8WVK2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SNRNP27Q8WVK2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SNRNP27Q8WVK2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SNRNP27Q8WVK2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.79■■□□□ 1.56
SNRNP27Q8WVK2 RNF126P1-201ENST00000567452 1320 ntBASIC24.79■■□□□ 1.56
SNRNP27Q8WVK2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
SNRNP27Q8WVK2 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms