Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMIM4Q8WVI0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMIM4Q8WVI0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMIM4Q8WVI0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMIM4Q8WVI0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SMIM4Q8WVI0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SMIM4Q8WVI0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMIM4Q8WVI0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SMIM4Q8WVI0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC22.22■■□□□ 1.15
SMIM4Q8WVI0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC22.22■■□□□ 1.15
SMIM4Q8WVI0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SMIM4Q8WVI0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMIM4Q8WVI0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMIM4Q8WVI0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SMIM4Q8WVI0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMIM4Q8WVI0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMIM4Q8WVI0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMIM4Q8WVI0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SMIM4Q8WVI0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMIM4Q8WVI0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMIM4Q8WVI0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.2■■□□□ 1.14
SMIM4Q8WVI0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMIM4Q8WVI0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.2■■□□□ 1.14
SMIM4Q8WVI0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMIM4Q8WVI0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMIM4Q8WVI0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.2■■□□□ 1.14
SMIM4Q8WVI0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SMIM4Q8WVI0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.19■■□□□ 1.14
SMIM4Q8WVI0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.19■■□□□ 1.14
SMIM4Q8WVI0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMIM4Q8WVI0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SMIM4Q8WVI0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SMIM4Q8WVI0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.18■■□□□ 1.14
SMIM4Q8WVI0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
SMIM4Q8WVI0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.17■■□□□ 1.14
SMIM4Q8WVI0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMIM4Q8WVI0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC22.17■■□□□ 1.14
SMIM4Q8WVI0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
SMIM4Q8WVI0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMIM4Q8WVI0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.17■■□□□ 1.14
SMIM4Q8WVI0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SMIM4Q8WVI0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.16■■□□□ 1.14
SMIM4Q8WVI0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SMIM4Q8WVI0 AL449106.1-201ENST00000608517 1980 ntBASIC22.16■■□□□ 1.14
SMIM4Q8WVI0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SMIM4Q8WVI0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
SMIM4Q8WVI0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.15■■□□□ 1.14
SMIM4Q8WVI0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.15■■□□□ 1.14
SMIM4Q8WVI0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.14
SMIM4Q8WVI0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SMIM4Q8WVI0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.14■■□□□ 1.13
SMIM4Q8WVI0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
SMIM4Q8WVI0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.14■■□□□ 1.13
SMIM4Q8WVI0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SMIM4Q8WVI0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SMIM4Q8WVI0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.13■■□□□ 1.13
SMIM4Q8WVI0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.13■■□□□ 1.13
SMIM4Q8WVI0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMIM4Q8WVI0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMIM4Q8WVI0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMIM4Q8WVI0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMIM4Q8WVI0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMIM4Q8WVI0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMIM4Q8WVI0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMIM4Q8WVI0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMIM4Q8WVI0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMIM4Q8WVI0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMIM4Q8WVI0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.1■■□□□ 1.13
SMIM4Q8WVI0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
SMIM4Q8WVI0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.1■■□□□ 1.13
SMIM4Q8WVI0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SMIM4Q8WVI0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM4Q8WVI0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM4Q8WVI0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM4Q8WVI0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.09■■□□□ 1.13
SMIM4Q8WVI0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMIM4Q8WVI0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.07■■□□□ 1.12
SMIM4Q8WVI0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM4Q8WVI0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM4Q8WVI0 AC006077.2-201ENST00000623591 457 ntBASIC22.07■■□□□ 1.12
SMIM4Q8WVI0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
SMIM4Q8WVI0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
SMIM4Q8WVI0 LINC01003-201ENST00000564834 1764 ntBASIC22.06■■□□□ 1.12
SMIM4Q8WVI0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMIM4Q8WVI0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.05■■□□□ 1.12
SMIM4Q8WVI0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMIM4Q8WVI0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC22.05■■□□□ 1.12
SMIM4Q8WVI0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMIM4Q8WVI0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMIM4Q8WVI0 AC010864.1-201ENST00000609407 1511 ntBASIC22.05■■□□□ 1.12
SMIM4Q8WVI0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMIM4Q8WVI0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.04■■□□□ 1.12
SMIM4Q8WVI0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMIM4Q8WVI0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SMIM4Q8WVI0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMIM4Q8WVI0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMIM4Q8WVI0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SMIM4Q8WVI0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SMIM4Q8WVI0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMIM4Q8WVI0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms