Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.56■■□□□ 1.68
HMGCLL1Q8TB92 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.56■■□□□ 1.68
HMGCLL1Q8TB92 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HMGCLL1Q8TB92 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HMGCLL1Q8TB92 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
HMGCLL1Q8TB92 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
HMGCLL1Q8TB92 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HMGCLL1Q8TB92 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HMGCLL1Q8TB92 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HMGCLL1Q8TB92 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HMGCLL1Q8TB92 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
HMGCLL1Q8TB92 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HMGCLL1Q8TB92 RPS2P35-201ENST00000443417 897 ntBASIC25.53■■□□□ 1.68
HMGCLL1Q8TB92 AC010864.1-201ENST00000609407 1511 ntBASIC25.53■■□□□ 1.68
HMGCLL1Q8TB92 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HMGCLL1Q8TB92 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HMGCLL1Q8TB92 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HMGCLL1Q8TB92 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.52■■□□□ 1.68
HMGCLL1Q8TB92 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
HMGCLL1Q8TB92 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCLL1Q8TB92 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
HMGCLL1Q8TB92 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
HMGCLL1Q8TB92 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HMGCLL1Q8TB92 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.5■■□□□ 1.67
HMGCLL1Q8TB92 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HMGCLL1Q8TB92 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HMGCLL1Q8TB92 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HMGCLL1Q8TB92 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
HMGCLL1Q8TB92 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
HMGCLL1Q8TB92 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.48■■□□□ 1.67
HMGCLL1Q8TB92 AC044849.2-201ENST00000606596 710 ntBASIC25.48■■□□□ 1.67
HMGCLL1Q8TB92 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.47■■□□□ 1.67
HMGCLL1Q8TB92 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
HMGCLL1Q8TB92 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HMGCLL1Q8TB92 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HMGCLL1Q8TB92 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.46■■□□□ 1.67
HMGCLL1Q8TB92 AC142086.6-201ENST00000621154 1765 ntBASIC25.46■■□□□ 1.67
HMGCLL1Q8TB92 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.45■■□□□ 1.66
HMGCLL1Q8TB92 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
HMGCLL1Q8TB92 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HMGCLL1Q8TB92 AC108673.1-201ENST00000510422 1159 ntBASIC25.44■■□□□ 1.66
HMGCLL1Q8TB92 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HMGCLL1Q8TB92 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HMGCLL1Q8TB92 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.43■■□□□ 1.66
HMGCLL1Q8TB92 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.42■■□□□ 1.66
HMGCLL1Q8TB92 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HMGCLL1Q8TB92 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
HMGCLL1Q8TB92 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HMGCLL1Q8TB92 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HMGCLL1Q8TB92 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.4■■□□□ 1.66
HMGCLL1Q8TB92 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
HMGCLL1Q8TB92 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HMGCLL1Q8TB92 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HMGCLL1Q8TB92 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
HMGCLL1Q8TB92 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
HMGCLL1Q8TB92 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
HMGCLL1Q8TB92 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
HMGCLL1Q8TB92 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
HMGCLL1Q8TB92 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.39■■□□□ 1.65
HMGCLL1Q8TB92 AL139393.2-201ENST00000608721 2025 ntBASIC25.39■■□□□ 1.65
HMGCLL1Q8TB92 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.65
HMGCLL1Q8TB92 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
HMGCLL1Q8TB92 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
HMGCLL1Q8TB92 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HMGCLL1Q8TB92 MIR6090-201ENST00000622481 60 ntBASIC25.37■■□□□ 1.65
HMGCLL1Q8TB92 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.35■■□□□ 1.65
HMGCLL1Q8TB92 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HMGCLL1Q8TB92 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.34■■□□□ 1.65
HMGCLL1Q8TB92 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
HMGCLL1Q8TB92 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
HMGCLL1Q8TB92 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HMGCLL1Q8TB92 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.33■■□□□ 1.65
HMGCLL1Q8TB92 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
HMGCLL1Q8TB92 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HMGCLL1Q8TB92 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
HMGCLL1Q8TB92 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
HMGCLL1Q8TB92 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
HMGCLL1Q8TB92 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HMGCLL1Q8TB92 DRD5P2-201ENST00000421395 2012 ntBASIC25.3■■□□□ 1.64
HMGCLL1Q8TB92 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
HMGCLL1Q8TB92 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
HMGCLL1Q8TB92 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HMGCLL1Q8TB92 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
HMGCLL1Q8TB92 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HMGCLL1Q8TB92 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.29■■□□□ 1.64
HMGCLL1Q8TB92 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.29■■□□□ 1.64
HMGCLL1Q8TB92 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
HMGCLL1Q8TB92 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HMGCLL1Q8TB92 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HMGCLL1Q8TB92 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.28■■□□□ 1.64
HMGCLL1Q8TB92 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.28■■□□□ 1.64
HMGCLL1Q8TB92 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HMGCLL1Q8TB92 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HMGCLL1Q8TB92 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.26■■□□□ 1.63
HMGCLL1Q8TB92 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.26■■□□□ 1.63
HMGCLL1Q8TB92 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HMGCLL1Q8TB92 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.25■■□□□ 1.63
HMGCLL1Q8TB92 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
HMGCLL1Q8TB92 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
HMGCLL1Q8TB92 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms