Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
RNF169Q8NCN4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RNF169Q8NCN4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
RNF169Q8NCN4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.4■■■□□ 2.14
RNF169Q8NCN4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.4■■■□□ 2.14
RNF169Q8NCN4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RNF169Q8NCN4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
RNF169Q8NCN4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
RNF169Q8NCN4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
RNF169Q8NCN4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RNF169Q8NCN4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RNF169Q8NCN4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RNF169Q8NCN4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
RNF169Q8NCN4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.35■■■□□ 2.13
RNF169Q8NCN4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNF169Q8NCN4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNF169Q8NCN4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RNF169Q8NCN4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNF169Q8NCN4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.34■■■□□ 2.13
RNF169Q8NCN4 HSD17B1P1-201ENST00000590052 955 ntBASIC28.34■■■□□ 2.13
RNF169Q8NCN4 LINC00273-201ENST00000539813 1452 ntBASIC28.33■■■□□ 2.13
RNF169Q8NCN4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
RNF169Q8NCN4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.32■■■□□ 2.12
RNF169Q8NCN4 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.32■■■□□ 2.12
RNF169Q8NCN4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.32■■■□□ 2.12
RNF169Q8NCN4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.32■■■□□ 2.12
RNF169Q8NCN4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RNF169Q8NCN4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RNF169Q8NCN4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF169Q8NCN4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF169Q8NCN4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF169Q8NCN4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF169Q8NCN4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
RNF169Q8NCN4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RNF169Q8NCN4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RNF169Q8NCN4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
RNF169Q8NCN4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.29■■■□□ 2.12
RNF169Q8NCN4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.29■■■□□ 2.12
RNF169Q8NCN4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
RNF169Q8NCN4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RNF169Q8NCN4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.27■■■□□ 2.12
RNF169Q8NCN4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RNF169Q8NCN4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.27■■■□□ 2.12
RNF169Q8NCN4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
RNF169Q8NCN4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RNF169Q8NCN4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
RNF169Q8NCN4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.25■■■□□ 2.11
RNF169Q8NCN4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RNF169Q8NCN4 AC127502.1-201ENST00000399971 1502 ntBASIC28.24■■■□□ 2.11
RNF169Q8NCN4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RNF169Q8NCN4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RNF169Q8NCN4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RNF169Q8NCN4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RNF169Q8NCN4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.21■■■□□ 2.11
RNF169Q8NCN4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.2■■■□□ 2.1
RNF169Q8NCN4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF169Q8NCN4 AL135925.1-201ENST00000605920 1701 ntBASIC28.19■■■□□ 2.1
RNF169Q8NCN4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.19■■■□□ 2.1
RNF169Q8NCN4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF169Q8NCN4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
RNF169Q8NCN4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.18■■■□□ 2.1
RNF169Q8NCN4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
RNF169Q8NCN4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RNF169Q8NCN4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
RNF169Q8NCN4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RNF169Q8NCN4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
RNF169Q8NCN4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RNF169Q8NCN4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.14■■■□□ 2.1
RNF169Q8NCN4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.13■■■□□ 2.09
RNF169Q8NCN4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RNF169Q8NCN4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.12■■■□□ 2.09
RNF169Q8NCN4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
RNF169Q8NCN4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
RNF169Q8NCN4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
RNF169Q8NCN4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RNF169Q8NCN4 WHAMMP2-203ENST00000563942 1603 ntBASIC28.1■■■□□ 2.09
RNF169Q8NCN4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
RNF169Q8NCN4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.09■■■□□ 2.09
RNF169Q8NCN4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.09■■■□□ 2.09
RNF169Q8NCN4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
RNF169Q8NCN4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
RNF169Q8NCN4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.08■■■□□ 2.09
RNF169Q8NCN4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
RNF169Q8NCN4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
RNF169Q8NCN4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
RNF169Q8NCN4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.07■■■□□ 2.08
RNF169Q8NCN4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.07■■■□□ 2.08
RNF169Q8NCN4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RNF169Q8NCN4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.07■■■□□ 2.08
RNF169Q8NCN4 AC135983.2-203ENST00000454486 1613 ntBASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms