Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ABHD17AP4-201ENST00000411545 909 ntBASIC25.81■■□□□ 1.72
TRAM1L1Q8N609 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
TRAM1L1Q8N609 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRAM1L1Q8N609 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
TRAM1L1Q8N609 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRAM1L1Q8N609 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.8■■□□□ 1.72
TRAM1L1Q8N609 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRAM1L1Q8N609 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRAM1L1Q8N609 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TRAM1L1Q8N609 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.8■■□□□ 1.72
TRAM1L1Q8N609 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
TRAM1L1Q8N609 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRAM1L1Q8N609 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
TRAM1L1Q8N609 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.78■■□□□ 1.72
TRAM1L1Q8N609 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.78■■□□□ 1.72
TRAM1L1Q8N609 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TRAM1L1Q8N609 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.77■■□□□ 1.72
TRAM1L1Q8N609 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
TRAM1L1Q8N609 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.72
TRAM1L1Q8N609 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
TRAM1L1Q8N609 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRAM1L1Q8N609 LINC00273-201ENST00000539813 1452 ntBASIC25.75■■□□□ 1.71
TRAM1L1Q8N609 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRAM1L1Q8N609 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
TRAM1L1Q8N609 ZNRF2P2-203ENST00000454624 420 ntBASIC25.74■■□□□ 1.71
TRAM1L1Q8N609 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.74■■□□□ 1.71
TRAM1L1Q8N609 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRAM1L1Q8N609 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRAM1L1Q8N609 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.74■■□□□ 1.71
TRAM1L1Q8N609 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRAM1L1Q8N609 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRAM1L1Q8N609 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.73■■□□□ 1.71
TRAM1L1Q8N609 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.73■■□□□ 1.71
TRAM1L1Q8N609 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRAM1L1Q8N609 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
TRAM1L1Q8N609 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.73■■□□□ 1.71
TRAM1L1Q8N609 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TRAM1L1Q8N609 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
TRAM1L1Q8N609 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRAM1L1Q8N609 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRAM1L1Q8N609 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRAM1L1Q8N609 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRAM1L1Q8N609 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRAM1L1Q8N609 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TRAM1L1Q8N609 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
TRAM1L1Q8N609 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.7■■□□□ 1.7
TRAM1L1Q8N609 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRAM1L1Q8N609 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TRAM1L1Q8N609 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRAM1L1Q8N609 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.67■■□□□ 1.7
TRAM1L1Q8N609 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.67■■□□□ 1.7
TRAM1L1Q8N609 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRAM1L1Q8N609 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
TRAM1L1Q8N609 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.66■■□□□ 1.7
TRAM1L1Q8N609 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.66■■□□□ 1.7
TRAM1L1Q8N609 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRAM1L1Q8N609 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRAM1L1Q8N609 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.66■■□□□ 1.7
TRAM1L1Q8N609 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRAM1L1Q8N609 AC135983.2-203ENST00000454486 1613 ntBASIC25.65■■□□□ 1.7
TRAM1L1Q8N609 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.64■■□□□ 1.7
TRAM1L1Q8N609 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRAM1L1Q8N609 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.64■■□□□ 1.7
TRAM1L1Q8N609 LINC01971-201ENST00000617888 1048 ntBASIC25.64■■□□□ 1.7
TRAM1L1Q8N609 AP004833.2-201ENST00000532228 1454 ntBASIC25.64■■□□□ 1.69
TRAM1L1Q8N609 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.63■■□□□ 1.69
TRAM1L1Q8N609 AL139393.2-201ENST00000608721 2025 ntBASIC25.63■■□□□ 1.69
TRAM1L1Q8N609 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRAM1L1Q8N609 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
TRAM1L1Q8N609 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRAM1L1Q8N609 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
TRAM1L1Q8N609 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRAM1L1Q8N609 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
TRAM1L1Q8N609 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRAM1L1Q8N609 MIR7108-201ENST00000614319 87 ntBASIC25.61■■□□□ 1.69
TRAM1L1Q8N609 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRAM1L1Q8N609 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.6■■□□□ 1.69
TRAM1L1Q8N609 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRAM1L1Q8N609 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRAM1L1Q8N609 WHAMMP2-203ENST00000563942 1603 ntBASIC25.59■■□□□ 1.69
TRAM1L1Q8N609 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TRAM1L1Q8N609 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRAM1L1Q8N609 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.56■■□□□ 1.68
TRAM1L1Q8N609 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRAM1L1Q8N609 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRAM1L1Q8N609 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRAM1L1Q8N609 DUX4L11-201ENST00000611504 1267 ntBASIC25.55■■□□□ 1.68
TRAM1L1Q8N609 DUX4L12-201ENST00000614593 1267 ntBASIC25.55■■□□□ 1.68
TRAM1L1Q8N609 DUX4L14-201ENST00000621227 1267 ntBASIC25.55■■□□□ 1.68
TRAM1L1Q8N609 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRAM1L1Q8N609 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TRAM1L1Q8N609 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.54■■□□□ 1.68
TRAM1L1Q8N609 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRAM1L1Q8N609 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
TRAM1L1Q8N609 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.53■■□□□ 1.68
TRAM1L1Q8N609 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TRAM1L1Q8N609 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TRAM1L1Q8N609 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRAM1L1Q8N609 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TRAM1L1Q8N609 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms