Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
TTC39CQ8N584 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
TTC39CQ8N584 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.67■■■□□ 2.02
TTC39CQ8N584 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TTC39CQ8N584 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TTC39CQ8N584 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.67■■■□□ 2.02
TTC39CQ8N584 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
TTC39CQ8N584 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TTC39CQ8N584 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
TTC39CQ8N584 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.66■■■□□ 2.02
TTC39CQ8N584 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
TTC39CQ8N584 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TTC39CQ8N584 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TTC39CQ8N584 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TTC39CQ8N584 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.65■■■□□ 2.02
TTC39CQ8N584 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.65■■■□□ 2.02
TTC39CQ8N584 AC021231.2-201ENST00000594613 730 ntBASIC27.65■■■□□ 2.02
TTC39CQ8N584 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
TTC39CQ8N584 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.64■■■□□ 2.02
TTC39CQ8N584 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.64■■■□□ 2.02
TTC39CQ8N584 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
TTC39CQ8N584 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
TTC39CQ8N584 LINC00273-201ENST00000539813 1452 ntBASIC27.64■■■□□ 2.01
TTC39CQ8N584 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
TTC39CQ8N584 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TTC39CQ8N584 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
TTC39CQ8N584 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.62■■■□□ 2.01
TTC39CQ8N584 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TTC39CQ8N584 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.62■■■□□ 2.01
TTC39CQ8N584 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
TTC39CQ8N584 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.61■■■□□ 2.01
TTC39CQ8N584 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
TTC39CQ8N584 AL139393.2-201ENST00000608721 2025 ntBASIC27.6■■■□□ 2.01
TTC39CQ8N584 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
TTC39CQ8N584 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
TTC39CQ8N584 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.6■■■□□ 2.01
TTC39CQ8N584 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
TTC39CQ8N584 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.59■■■□□ 2.01
TTC39CQ8N584 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
TTC39CQ8N584 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.59■■■□□ 2.01
TTC39CQ8N584 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.59■■■□□ 2.01
TTC39CQ8N584 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
TTC39CQ8N584 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.58■■■□□ 2.01
TTC39CQ8N584 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.58■■■□□ 2.01
TTC39CQ8N584 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TTC39CQ8N584 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TTC39CQ8N584 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.58■■■□□ 2.01
TTC39CQ8N584 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.58■■■□□ 2.01
TTC39CQ8N584 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
TTC39CQ8N584 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TTC39CQ8N584 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.57■■■□□ 2
TTC39CQ8N584 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.57■■■□□ 2
TTC39CQ8N584 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
TTC39CQ8N584 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.56■■■□□ 2
TTC39CQ8N584 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.56■■■□□ 2
TTC39CQ8N584 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
TTC39CQ8N584 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
TTC39CQ8N584 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TTC39CQ8N584 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TTC39CQ8N584 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
TTC39CQ8N584 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
TTC39CQ8N584 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.54■■■□□ 2
TTC39CQ8N584 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.54■■■□□ 2
TTC39CQ8N584 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.54■■■□□ 2
TTC39CQ8N584 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TTC39CQ8N584 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
TTC39CQ8N584 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.53■■■□□ 2
TTC39CQ8N584 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.53■■■□□ 2
TTC39CQ8N584 ABCB10P3-201ENST00000561950 2166 ntBASIC27.53■■■□□ 2
TTC39CQ8N584 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
TTC39CQ8N584 AC135983.2-203ENST00000454486 1613 ntBASIC27.52■■■□□ 2
TTC39CQ8N584 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TTC39CQ8N584 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.51■■□□□ 1.99
TTC39CQ8N584 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
TTC39CQ8N584 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
TTC39CQ8N584 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.49■■□□□ 1.99
TTC39CQ8N584 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TTC39CQ8N584 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.48■■□□□ 1.99
TTC39CQ8N584 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TTC39CQ8N584 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TTC39CQ8N584 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
TTC39CQ8N584 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
TTC39CQ8N584 ABHD17AP4-201ENST00000411545 909 ntBASIC27.47■■□□□ 1.99
TTC39CQ8N584 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.47■■□□□ 1.99
TTC39CQ8N584 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.46■■□□□ 1.99
TTC39CQ8N584 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.46■■□□□ 1.99
TTC39CQ8N584 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
TTC39CQ8N584 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
TTC39CQ8N584 LINC01971-201ENST00000617888 1048 ntBASIC27.45■■□□□ 1.98
TTC39CQ8N584 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TTC39CQ8N584 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
TTC39CQ8N584 ZNRF2P2-203ENST00000454624 420 ntBASIC27.44■■□□□ 1.98
TTC39CQ8N584 WHAMMP2-203ENST00000563942 1603 ntBASIC27.43■■□□□ 1.98
TTC39CQ8N584 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.43■■□□□ 1.98
TTC39CQ8N584 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TTC39CQ8N584 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.42■■□□□ 1.98
TTC39CQ8N584 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TTC39CQ8N584 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TTC39CQ8N584 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.41■■□□□ 1.98
TTC39CQ8N584 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.41■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms