Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.68■■■□□ 2.82
DDX60Q8IY21 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
DDX60Q8IY21 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
DDX60Q8IY21 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.67■■■□□ 2.82
DDX60Q8IY21 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
DDX60Q8IY21 HES6-205ENST00000409356 528 ntTSL 2 BASIC32.65■■■□□ 2.82
DDX60Q8IY21 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.65■■■□□ 2.82
DDX60Q8IY21 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
DDX60Q8IY21 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
DDX60Q8IY21 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
DDX60Q8IY21 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
DDX60Q8IY21 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
DDX60Q8IY21 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
DDX60Q8IY21 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
DDX60Q8IY21 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
DDX60Q8IY21 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
DDX60Q8IY21 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.6■■■□□ 2.81
DDX60Q8IY21 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
DDX60Q8IY21 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
DDX60Q8IY21 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.59■■■□□ 2.81
DDX60Q8IY21 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
DDX60Q8IY21 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.58■■■□□ 2.81
DDX60Q8IY21 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
DDX60Q8IY21 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32.57■■■□□ 2.8
DDX60Q8IY21 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32.57■■■□□ 2.8
DDX60Q8IY21 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
DDX60Q8IY21 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.56■■■□□ 2.8
DDX60Q8IY21 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
DDX60Q8IY21 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
DDX60Q8IY21 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.55■■■□□ 2.8
DDX60Q8IY21 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.54■■■□□ 2.8
DDX60Q8IY21 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
DDX60Q8IY21 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.54■■■□□ 2.8
DDX60Q8IY21 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
DDX60Q8IY21 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
DDX60Q8IY21 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.53■■■□□ 2.8
DDX60Q8IY21 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
DDX60Q8IY21 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
DDX60Q8IY21 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.51■■■□□ 2.8
DDX60Q8IY21 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
DDX60Q8IY21 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC32.51■■■□□ 2.8
DDX60Q8IY21 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
DDX60Q8IY21 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
DDX60Q8IY21 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.49■■■□□ 2.79
DDX60Q8IY21 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.49■■■□□ 2.79
DDX60Q8IY21 AC135983.2-203ENST00000454486 1613 ntBASIC32.49■■■□□ 2.79
DDX60Q8IY21 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
DDX60Q8IY21 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
DDX60Q8IY21 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.48■■■□□ 2.79
DDX60Q8IY21 WHAMMP2-203ENST00000563942 1603 ntBASIC32.48■■■□□ 2.79
DDX60Q8IY21 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
DDX60Q8IY21 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
DDX60Q8IY21 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.47■■■□□ 2.79
DDX60Q8IY21 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
DDX60Q8IY21 AL135925.1-201ENST00000605920 1701 ntBASIC32.46■■■□□ 2.79
DDX60Q8IY21 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
DDX60Q8IY21 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
DDX60Q8IY21 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
DDX60Q8IY21 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.78
DDX60Q8IY21 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
DDX60Q8IY21 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC32.44■■■□□ 2.78
DDX60Q8IY21 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.43■■■□□ 2.78
DDX60Q8IY21 AC127502.1-201ENST00000399971 1502 ntBASIC32.43■■■□□ 2.78
DDX60Q8IY21 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
DDX60Q8IY21 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
DDX60Q8IY21 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
DDX60Q8IY21 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
DDX60Q8IY21 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
DDX60Q8IY21 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.41■■■□□ 2.78
DDX60Q8IY21 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
DDX60Q8IY21 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
DDX60Q8IY21 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
DDX60Q8IY21 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
DDX60Q8IY21 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
DDX60Q8IY21 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
DDX60Q8IY21 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.4■■■□□ 2.78
DDX60Q8IY21 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
DDX60Q8IY21 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
DDX60Q8IY21 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
DDX60Q8IY21 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.4■■■□□ 2.78
DDX60Q8IY21 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
DDX60Q8IY21 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
DDX60Q8IY21 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.39■■■□□ 2.78
DDX60Q8IY21 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
DDX60Q8IY21 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
DDX60Q8IY21 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
DDX60Q8IY21 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
DDX60Q8IY21 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
DDX60Q8IY21 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.37■■■□□ 2.77
DDX60Q8IY21 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.36■■■□□ 2.77
DDX60Q8IY21 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.36■■■□□ 2.77
DDX60Q8IY21 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.35■■■□□ 2.77
DDX60Q8IY21 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.35■■■□□ 2.77
DDX60Q8IY21 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
DDX60Q8IY21 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
DDX60Q8IY21 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
DDX60Q8IY21 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
DDX60Q8IY21 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
DDX60Q8IY21 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
DDX60Q8IY21 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms