Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RAB43Q86YS6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
RAB43Q86YS6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAB43Q86YS6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RAB43Q86YS6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.61■■□□□ 1.53
RAB43Q86YS6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RAB43Q86YS6 CR559946.2-201ENST00000623684 991 ntBASIC24.6■■□□□ 1.53
RAB43Q86YS6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RAB43Q86YS6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.6■■□□□ 1.53
RAB43Q86YS6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAB43Q86YS6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAB43Q86YS6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAB43Q86YS6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.59■■□□□ 1.53
RAB43Q86YS6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RAB43Q86YS6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAB43Q86YS6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAB43Q86YS6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RAB43Q86YS6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.57■■□□□ 1.52
RAB43Q86YS6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAB43Q86YS6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAB43Q86YS6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAB43Q86YS6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAB43Q86YS6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAB43Q86YS6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAB43Q86YS6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.54■■□□□ 1.52
RAB43Q86YS6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.53■■□□□ 1.52
RAB43Q86YS6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.52■■□□□ 1.52
RAB43Q86YS6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RAB43Q86YS6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RAB43Q86YS6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RAB43Q86YS6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAB43Q86YS6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAB43Q86YS6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.51■■□□□ 1.51
RAB43Q86YS6 DUX4L13-201ENST00000554103 1267 ntBASIC24.51■■□□□ 1.51
RAB43Q86YS6 DUX4L15-201ENST00000611059 1267 ntBASIC24.51■■□□□ 1.51
RAB43Q86YS6 DUX4L23-201ENST00000615195 1269 ntBASIC24.51■■□□□ 1.51
RAB43Q86YS6 DUX4L24-201ENST00000617576 1269 ntBASIC24.51■■□□□ 1.51
RAB43Q86YS6 DUX4L22-201ENST00000618238 1269 ntBASIC24.51■■□□□ 1.51
RAB43Q86YS6 DUX4L20-201ENST00000619712 1269 ntBASIC24.51■■□□□ 1.51
RAB43Q86YS6 DUX4L21-201ENST00000622058 1269 ntBASIC24.51■■□□□ 1.51
RAB43Q86YS6 DUX4L10-201ENST00000622460 1267 ntBASIC24.51■■□□□ 1.51
RAB43Q86YS6 DUX4L25-201ENST00000624915 1269 ntBASIC24.51■■□□□ 1.51
RAB43Q86YS6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAB43Q86YS6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.5■■□□□ 1.51
RAB43Q86YS6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
RAB43Q86YS6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAB43Q86YS6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAB43Q86YS6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RAB43Q86YS6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAB43Q86YS6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAB43Q86YS6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAB43Q86YS6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.47■■□□□ 1.51
RAB43Q86YS6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.47■■□□□ 1.51
RAB43Q86YS6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
RAB43Q86YS6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAB43Q86YS6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAB43Q86YS6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
RAB43Q86YS6 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.45■■□□□ 1.5
RAB43Q86YS6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAB43Q86YS6 ABCB10P3-201ENST00000561950 2166 ntBASIC24.43■■□□□ 1.5
RAB43Q86YS6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.43■■□□□ 1.5
RAB43Q86YS6 AC010864.1-201ENST00000609407 1511 ntBASIC24.43■■□□□ 1.5
RAB43Q86YS6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RAB43Q86YS6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.43■■□□□ 1.5
RAB43Q86YS6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RAB43Q86YS6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RAB43Q86YS6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.42■■□□□ 1.5
RAB43Q86YS6 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.42■■□□□ 1.5
RAB43Q86YS6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.42■■□□□ 1.5
RAB43Q86YS6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.42■■□□□ 1.5
RAB43Q86YS6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.42■■□□□ 1.5
RAB43Q86YS6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.42■■□□□ 1.5
RAB43Q86YS6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.42■■□□□ 1.5
RAB43Q86YS6 ABCB10P1-201ENST00000614297 2181 ntBASIC24.42■■□□□ 1.5
RAB43Q86YS6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RAB43Q86YS6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RAB43Q86YS6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RAB43Q86YS6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RAB43Q86YS6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RAB43Q86YS6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAB43Q86YS6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RAB43Q86YS6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.4■■□□□ 1.5
RAB43Q86YS6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RAB43Q86YS6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.39■■□□□ 1.5
RAB43Q86YS6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RAB43Q86YS6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RAB43Q86YS6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RAB43Q86YS6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAB43Q86YS6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
RAB43Q86YS6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.38■■□□□ 1.49
RAB43Q86YS6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RAB43Q86YS6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RAB43Q86YS6 LINC00273-201ENST00000539813 1452 ntBASIC24.38■■□□□ 1.49
RAB43Q86YS6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.37■■□□□ 1.49
RAB43Q86YS6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RAB43Q86YS6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAB43Q86YS6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RAB43Q86YS6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
RAB43Q86YS6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAB43Q86YS6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms